Pre_GI: BLASTP Hits

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Query: NC_016842:775368:778269 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete

Start: 778269, End: 780239, Length: 1971

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021508:775264:7781657781657801351971Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein01350
NC_000919:773784:7766857766857786551971Treponema pallidum subsp. pallidum str. Nichols, complete genomehypothetical protein01350
NC_010741:775000:7781337781337801031971Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein01350
NC_016843:775371:7784567784567804261971Treponema pallidum subsp. pertenue str. Gauthier chromosome,hypothetical protein01350
NC_016844:775334:7786237786237805931971Treponema pallidum subsp. pallidum DAL-1 chromosome, completehypothetical protein01350
NC_016848:775822:7787237787237806931971Treponema pallidum subsp. pertenue str. CDC2 chromosome, completehypothetical protein01350
NC_017268:775000:7779357779357799051971Treponema pallidum subsp. pallidum str. Chicago chromosome,putative polymerase01350
NC_015714:768500:7715647715647735341971Treponema paraluiscuniculi Cuniculi A chromosome, complete genomehypothetical protein01347
NC_017243:1499757:1515492151549215174771986Brachyspira intermedia PWS/A chromosome, complete genomePolymerase9e-88325
NC_014150:233194:2392902392902412721983Brachyspira murdochii DSM 12563 chromosome, complete genomeprotein of unknown function DUF3426e-85315
NC_012225:377441:3900153900153919911977Brachyspira hyodysenteriae WA1, complete genomePolymerase3e-84313
NC_006156:271410:2781822781822800861905Borrelia garinii PBi chromosome linear, complete sequencehypothetical protein3e-80300
NC_001318:270488:2794072794072813111905Borrelia burgdorferi B31, complete genomehypothetical protein2e-80300
NC_011728:269853:2787752787752806791905Borrelia burgdorferi ZS7, complete genomehypothetical protein2e-80300
NC_015921:272517:2779722779722798761905Borrelia bissettii DN127 chromosome, complete genomehypothetical protein3e-80299
NC_008277:272741:2782922782922801961905Borrelia afzelii PKo, complete genomehypothetical protein5e-79296
NC_017238:272980:2785312785312804351905Borrelia afzelii PKo chromosome, complete genomehypothetical protein5e-79296
NC_018607:1134900:1144679114467911466461968Brachyspira pilosicoli B2904 chromosome, complete genomepolymerase3e-79296
NC_019908:852230:8573018573018592681968Brachyspira pilosicoli P43/6/78 chromosome, complete genomepolymerase3e-79296
NC_018604:1329228:1339002133900213409691968Brachyspira pilosicoli WesB complete genomepolymerase3e-79296
NC_014330:2409559:2420925242092524228921968Brachyspira pilosicoli 95/1000 chromosome, complete genomepolymerase3e-79296
NC_008710:277207:2814372814372833351899Borrelia turicatae 91E135, complete genomehypothetical protein4e-75283
NC_014377:1089894:1099995109999511014341440Thermosediminibacter oceani DSM 16646 chromosome, complete genomeprotein of unknown function DUF3423e-68260
NC_010001:3266561:3273439327343932750371599Clostridium phytofermentans ISDg, complete genomeprotein of unknown function DUF3423e-55217
NC_008346:983816:9973719973719987741404Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein4e-50199
NC_014376:3671441:3684239368423936859931755Clostridium saccharolyticum WM1 chromosome, complete genomeprotein of unknown function DUF3421e-44181
NC_012778:841934:8541648541648557711608Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-38161
NC_012225:445500:4627434627434644791737Brachyspira hyodysenteriae WA1, complete genomePredicted polymerase2e-26120
NC_015577:1462874:1486119148611914875011383Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein6e-26119
NC_010814:2394250:2395755239575523973171563Geobacter lovleyi SZ, complete genomeprotein of unknown function DUF3428e-26119
NC_009784:2129069:2129069212906921307691701Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein3e-25117
NC_004460:1237129:1252993125299312546661674Vibrio vulnificus CMCP6 chromosome II, complete sequencePredicted polymerase7e-22106
NC_005140:1820970:1837308183730818389811674Vibrio vulnificus YJ016 chromosome II, complete sequencepredicted polymerase7e-22105
NC_010516:2900057:2921338292133829233712034Clostridium botulinum B1 str. Okra, complete genomehypothetical protein2e-21104
NC_009699:2901497:2925871292587129279042034Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein1e-20102
NC_012881:3727150:3743593374359337447051113Desulfovibrio salexigens DSM 2638, complete genomeprotein of unknown function DUF3422e-20101
NC_010520:2937981:2961694296169429637272034Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein2e-20101
NC_014328:1046958:1048918104891810508701953Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein2e-20100
NC_014377:1512217:1512217151221715140671851Thermosediminibacter oceani DSM 16646 chromosome, complete genomeprotein of unknown function DUF3424e-20100
NC_012563:3090954:3116281311628131183142034Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein2e-1997.8
NC_009495:2876865:2902192290219229042252034Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein2e-1997.8
NC_009697:2790277:2815604281560428176372034Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein2e-1997.8
NC_015573:569625:5722575722575741371881Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein4e-1997.1
NC_006510:1501487:1517620151762015203252706Geobacillus kaustophilus HTA426, complete genomehypothetical protein5e-1996.7
NC_010424:448865:4687554687554704791725Candidatus Desulforudis audaxviator MP104C, complete genomeprotein of unknown function DUF3422e-1894.4
NC_015565:2827444:2834781283478128363521572Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein4e-1790.1
NC_014220:2037560:2043881204388120458902010Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeprotein of unknown function DUF3422e-1688.6
NC_008593:1060548:1071087107108710730541968Clostridium novyi NT, complete genomehypothetical protein2e-1481.6
NC_020409:437781:4503654503654514861122Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein2e-1377.8
NC_020291:4502467:4504742450474245064811740Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein9e-1375.9
NC_020291:4944835:5002628500262850046041977Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative polymerase with PALM domain, HD hydrolase domain and Zn ribbon8e-1169.3
NC_013207:19154:2470624706278763171Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 4465e-0860.1
NC_015318:249445:2622332622332640231791Hippea maritima DSM 10411 chromosome, complete genomehypothetical protein7e-0859.7
NC_009617:4946000:4964793496479349667421950Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein3e-0757.8