Pre_GI: BLASTP Hits

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Query: NC_016842:1:7014 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete

Start: 7014, End: 8261, Length: 1248

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017268:1:7008700882611254Treponema pallidum subsp. pallidum str. Chicago chromosome,hypothetical protein0854
NC_016843:1:7014701482611248Treponema pallidum subsp. pertenue str. Gauthier chromosome,lipoprotein0853
NC_015714:1:7009700982621254Treponema paraluiscuniculi Cuniculi A chromosome, complete genomehypothetical protein0840
NC_021508:12543:1254312543137751233Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein2e-104379
NC_017268:1:1254612546137781233Treponema pallidum subsp. pallidum str. Chicago chromosome,hypothetical protein2e-104379
NC_016848:12548:1254812548137801233Treponema pallidum subsp. pertenue str. CDC2 chromosome, completelipoprotein2e-104379
NC_016844:12545:1254512545137771233Treponema pallidum subsp. pallidum DAL-1 chromosome, completehypothetical protein2e-104379
NC_016843:1:1254812548137801233Treponema pallidum subsp. pertenue str. Gauthier chromosome,lipoprotein2e-104379
NC_016842:1:1254812548137801233Treponema pallidum subsp. pertenue str. SamoaD chromosome, completelipoprotein2e-104379
NC_015714:1:1259112591138231233Treponema paraluiscuniculi Cuniculi A chromosome, complete genomehypothetical protein8e-103374
NC_015732:529201:5436385436385448521215Spirochaeta caldaria DSM 7334 chromosome, complete genomehypothetical protein2e-84313
NC_003454:370418:3868043868043880541251Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeHypothetical lipoprotein2e-61236
NC_003454:63500:1006501006501018941245Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeHypothetical lipoprotein9e-60231
NC_000919:12545:125451254513210666Treponema pallidum subsp. pallidum str. Nichols, complete genomehypothetical protein2e-52206
NC_010741:12542:125421254213207666Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein2e-52206
NC_000919:12545:131671316713775609Treponema pallidum subsp. pallidum str. Nichols, complete genomehypothetical protein7e-46185
NC_010741:12542:131641316413772609Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein7e-46185
NC_015707:1911431:1929720192972019307301011Thermotoga thermarum DSM 5069 chromosome, complete genomelipoprotein2e-43176