Pre_GI: BLASTN Hits

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Query: NC_016832:1182496 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,

Start: 1182496, End: 1213599, Length: 31104

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subspecies enterica serovar Typhi P-stx-12 is a clinical isolate obtained from a Typhoid Carrier in India. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004631:1182883*1182883121459931717Salmonella enterica subsp. enterica serovar Typhi Ty2, complete061060BLASTN svgBLASTP svg
NC_003198:1771432*1771432180593534504Salmonella enterica subsp. enterica serovar Typhi str. CT18,051430BLASTN svgBLASTP svg
NC_003197:1320861*1320861134738426524Salmonella typhimurium LT2, complete genome032850BLASTN svgBLASTP svg
NC_006905:13424741342474137811135638Salmonella enterica subsp. enterica serovar Choleraesuis str030750BLASTN svgBLASTP svg
NC_011149:1870931*1870931190072529795Salmonella enterica subsp. enterica serovar Agona str. SL483,023770BLASTN svgBLASTP svg
NC_010102:17797071779707181158331877Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,023750BLASTN svgBLASTP svg
NC_006511:1654959*1654959167339918441Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC017480BLASTN svgBLASTP svg
NC_011083:1323827*1323827134240718581Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,014350BLASTN svgBLASTP svg
NC_011080:1321268*1321268133914217875Salmonella enterica subsp. enterica serovar Newport str. SL254,014340BLASTN svgBLASTP svg
NC_010067:1655815*1655815168162625812Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete04869BLASTN svgBLASTP svg
NC_014121:1589389*1589389162248733099Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01673BLASTN svgBLASTP svg
NC_021066:839734*83973487672436991Raoultella ornithinolytica B6, complete genome01604BLASTN svgBLASTP svg
NC_003198:2453074*2453074247785124778Salmonella enterica subsp. enterica serovar Typhi str. CT18,01421BLASTN svgBLASTP svg
NC_004631:1881214*1881214190534324130Salmonella enterica subsp. enterica serovar Typhi Ty2, complete01400BLASTN svgBLASTP svg
NC_003198:1078113*1078113110191423802Salmonella enterica subsp. enterica serovar Typhi str. CT18,01400BLASTN svgBLASTP svg
NC_010102:45570374557037457661219576Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,01388BLASTN svgBLASTP svg
NC_003197:45518804551880457449822619Salmonella typhimurium LT2, complete genome01382BLASTN svgBLASTP svg
NC_010102:39554793955479397940323925Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,01372BLASTN svgBLASTP svg
NC_010102:23228662322866235445731592Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,01362BLASTN svgBLASTP svg
NC_010067:2304313*2304313233059926287Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete01179BLASTN svgBLASTP svg
NC_004431:30126683012668303118918522Escherichia coli CFT073, complete genome0944BLASTN svgBLASTP svg
NC_004431:24449722444972246809923128Escherichia coli CFT073, complete genome0944BLASTN svgBLASTP svg
NC_004431:2185750*2185750224915063401Escherichia coli CFT073, complete genome0916BLASTN svgBLASTP svg
NC_007606:4182188*4182188420162219435Shigella dysenteriae Sd197, complete genome0860BLASTN svgBLASTP svg
NC_013716:1178383*1178383120516726785Citrobacter rodentium ICC168, complete genome0852BLASTN svgBLASTP svg
NC_015663:3586836*3586836361030823473Enterobacter aerogenes KCTC 2190 chromosome, complete genome0805BLASTN svgBLASTP svg
NC_010498:10940001094000111633222333Escherichia coli SMS-3-5, complete genome0781BLASTN svgBLASTP svg
NC_014500:2589089*2589089260812419036Dickeya dadantii 3937 chromosome, complete genome0718BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome0710BLASTN svgBLASTP svg
NC_003143:31912463191246321275521510Yersinia pestis CO92, complete genome2e-177630BLASTN svgBLASTP svg
NC_003143:74116974116977078329615Yersinia pestis CO92, complete genome2e-177630BLASTN svgBLASTP svg
NC_004088:12657301265730129020024471Yersinia pestis KIM, complete genome2e-177630BLASTN svgBLASTP svg
NC_004088:15104671510467153309222626Yersinia pestis KIM, complete genome2e-177630BLASTN svgBLASTP svg
NC_005810:3021913*3021913304567123759Yersinia pestis biovar Microtus str. 91001, complete genome2e-177630BLASTN svgBLASTP svg
NC_008149:11956141195614122004824435Yersinia pestis Nepal516, complete genome2e-177630BLASTN svgBLASTP svg
NC_008149:14403711440371146301222642Yersinia pestis Nepal516, complete genome2e-177630BLASTN svgBLASTP svg
NC_008150:37119533711953374731835366Yersinia pestis Antiqua, complete genome2e-177630BLASTN svgBLASTP svg
NC_010159:409500*40950045168242183Yersinia pestis Angola, complete genome2e-177630BLASTN svgBLASTP svg
NC_005810:33330003333000336198528986Yersinia pestis biovar Microtus str. 91001, complete genome5e-175622BLASTN svgBLASTP svg
NC_005810:11302511130251115417023920Yersinia pestis biovar Microtus str. 91001, complete genome5e-175622BLASTN svgBLASTP svg
NC_004088:38591733859173388653627364Yersinia pestis KIM, complete genome5e-175622BLASTN svgBLASTP svg
NC_004088:3382148*3382148340611023963Yersinia pestis KIM, complete genome5e-175622BLASTN svgBLASTP svg
NC_004088:2491303*2491303251808626784Yersinia pestis KIM, complete genome5e-175622BLASTN svgBLASTP svg
NC_003143:12331281233128125981426687Yersinia pestis CO92, complete genome5e-175622BLASTN svgBLASTP svg
NC_008149:3251196*3251196327595124756Yersinia pestis Nepal516, complete genome5e-175622BLASTN svgBLASTP svg
NC_008149:65070665070667964628941Yersinia pestis Nepal516, complete genome5e-175622BLASTN svgBLASTP svg
NC_008150:34300003430000345505925060Yersinia pestis Antiqua, complete genome5e-175622BLASTN svgBLASTP svg
NC_008150:65089965089967359922701Yersinia pestis Antiqua, complete genome5e-175622BLASTN svgBLASTP svg
NC_010159:1668795*1668795168827719483Yersinia pestis Angola, complete genome5e-175622BLASTN svgBLASTP svg
NC_010159:24409472440947245913218186Yersinia pestis Angola, complete genome5e-175622BLASTN svgBLASTP svg
NC_010159:25969525969528600726313Yersinia pestis Angola, complete genome5e-175622BLASTN svgBLASTP svg
NC_010159:80966380966383240722745Yersinia pestis Angola, complete genome5e-175622BLASTN svgBLASTP svg
NC_010465:34653513465351350059935249Yersinia pseudotuberculosis YPIII, complete genome5e-175622BLASTN svgBLASTP svg
NC_010159:74181974181976361621798Yersinia pestis Angola, complete genome3e-170607BLASTN svgBLASTP svg
NC_010159:14179931417993144109923107Yersinia pestis Angola, complete genome4e-166593BLASTN svgBLASTP svg
NC_013421:27205002720500274898028481Pectobacterium wasabiae WPP163, complete genome4e-160573BLASTN svgBLASTP svg
NC_008150:25747942574794259632821535Yersinia pestis Antiqua, complete genome3e-145523BLASTN svgBLASTP svg
NC_020064:2697116*2697116272016423049Serratia marcescens FGI94, complete genome2e-143517BLASTN svgBLASTP svg
NC_010159:22523802252380227191719538Yersinia pestis Angola, complete genome3e-142513BLASTN svgBLASTP svg
NC_013508:1491945*1491945152068628742Edwardsiella tarda EIB202, complete genome2e-134488BLASTN svgBLASTP svg
NC_010159:10719371071937109241320477Yersinia pestis Angola, complete genome2e-131478BLASTN svgBLASTP svg
NC_014500:2479814*2479814250755827745Dickeya dadantii 3937 chromosome, complete genome2e-112414BLASTN svgBLASTP svg
NC_008149:33732293373229340909935871Yersinia pestis Nepal516, complete genome3e-99371BLASTN svgBLASTP svg
NC_004088:35053833505383354055935177Yersinia pestis KIM, complete genome3e-99371BLASTN svgBLASTP svg
NC_003143:87536787536791053535169Yersinia pestis CO92, complete genome3e-99371BLASTN svgBLASTP svg
NC_004088:2366000*2366000239081024811Yersinia pestis KIM, complete genome7e-97363BLASTN svgBLASTP svg
NC_004547:2470978*2470978249481623839Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-91345BLASTN svgBLASTP svg
NC_010159:2546590*2546590256968123092Yersinia pestis Angola, complete genome1e-76295BLASTN svgBLASTP svg
NC_005810:31423843142384317894536562Yersinia pestis biovar Microtus str. 91001, complete genome5e-73283BLASTN svgBLASTP svg
NC_008150:51378351378354909935317Yersinia pestis Antiqua, complete genome5e-73283BLASTN svgBLASTP svg
NC_010159:30339893033989305747023482Yersinia pestis Angola, complete genome5e-73283BLASTN svgBLASTP svg
NC_010159:34484903448490348540936920Yersinia pestis Angola, complete genome5e-73283BLASTN svgBLASTP svg
NC_004431:35131473513147354268029534Escherichia coli CFT073, complete genome1e-67266BLASTN svgBLASTP svg
NC_013961:1622616*1622616167386551250Erwinia amylovora, complete genome5e-67264BLASTN svgBLASTP svg
NC_013716:1138441*1138441116841529975Citrobacter rodentium ICC168, complete genome5e-64254BLASTN svgBLASTP svg
NC_013508:16874321687432172109933668Edwardsiella tarda EIB202, complete genome1e-61246BLASTN svgBLASTP svg
NC_011740:18318451831845185021818374Escherichia fergusonii ATCC 35469, complete genome7e-60240BLASTN svgBLASTP svg
NC_012779:3176820*3176820323178054961Edwardsiella ictaluri 93-146, complete genome7e-60240BLASTN svgBLASTP svg
NC_006511:1808815*1808815183245923645Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC6e-51210BLASTN svgBLASTP svg
NC_011080:11669511166951119330926359Salmonella enterica subsp. enterica serovar Newport str. SL254,4e-46194BLASTN svgBLASTP svg
NC_010102:2020762*2020762204160320842Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-46194BLASTN svgBLASTP svg
NC_011083:1173802*1173802119655222751Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,9e-44186BLASTN svgBLASTP svg
NC_003197:1170746*1170746119097320228Salmonella typhimurium LT2, complete genome9e-44186BLASTN svgBLASTP svg
NC_011080:1944226*1944226198035236127Salmonella enterica subsp. enterica serovar Newport str. SL254,9e-41176BLASTN svgBLASTP svg
NC_011149:1035990*1035990106096324974Salmonella enterica subsp. enterica serovar Agona str. SL483,9e-41176BLASTN svgBLASTP svg
NC_020181:1653261*1653261168347330213Enterobacter aerogenes EA1509E, complete genome1e-33153BLASTN svgBLASTP svg
NC_013850:28460692846069288409738029Klebsiella variicola At-22 chromosome, complete genome3e-31145BLASTN svgBLASTP svg
AP010958:36695003669500372827458775Escherichia coli O103:H2 str. 12009 DNA, complete genome8e-29137BLASTN svgBLASTP svg
CU928145:2973968*2973968299959925632Escherichia coli 55989 chromosome, complete genome8e-29137BLASTN svgBLASTP svg
NC_010488:48868488687267123804Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence8e-29137BLASTN svgBLASTP svg
NC_011748:2973968*2973968299959925632Escherichia coli 55989, complete genome8e-29137BLASTN svgBLASTP svg
NC_011750:10940001094000111509921100Escherichia coli IAI39 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
NC_010498:301000*30100034338442385Escherichia coli SMS-3-5, complete genome1e-27133BLASTN svgBLASTP svg
NC_009792:36653693665369370602240654Citrobacter koseri ATCC BAA-895, complete genome7e-26127BLASTN svgBLASTP svg
NC_002695:38522333852233387887626644Escherichia coli O157:H7 str. Sakai, complete genome7e-23117BLASTN svgBLASTP svg
NC_010067:25297502529750259435464605Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete7e-23117BLASTN svgBLASTP svg
NC_002655:39195453919545394618926645Escherichia coli O157:H7 EDL933, complete genome1e-21113BLASTN svgBLASTP svg
AC_000091:16270491627049165562928581Escherichia coli W3110 DNA, complete genome4e-21111BLASTN svgBLASTP svg
CP002185:17708151770815179359922785Escherichia coli W, complete genome4e-21111BLASTN svgBLASTP svg
CP002516:2305659*2305659232825322595Escherichia coli KO11, complete genome4e-21111BLASTN svgBLASTP svg
CU928160:16688421668842169164522804Escherichia coli IAI1 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_000913:1625500*1625500165193926440Escherichia coli K12, complete genome4e-21111BLASTN svgBLASTP svg
NC_004431:30409533040953306393422982Escherichia coli CFT073, complete genome4e-21111BLASTN svgBLASTP svg
NC_008563:50119975011997503931827322Escherichia coli APEC O1, complete genome4e-21111BLASTN svgBLASTP svg
NC_010468:2265423*2265423228519619774Escherichia coli ATCC 8739, complete genome4e-21111BLASTN svgBLASTP svg
NC_010473:1712984*1712984174109928116Escherichia coli str. K-12 substr. DH10B, complete genome4e-21111BLASTN svgBLASTP svg
NC_011750:15650001565000158659921600Escherichia coli IAI39 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_011751:18596061859606188482925224Escherichia coli UMN026 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_020063:4127161*4127161415360026440Enterobacteriaceae bacterium strain FGI 57, complete genome2e-20109BLASTN svgBLASTP svg
NC_011149:3863913*3863913388509921187Salmonella enterica subsp. enterica serovar Agona str. SL483,7e-20107BLASTN svgBLASTP svg
NC_015410:1202370*1202370122824825879Pseudomonas mendocina NK-01 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_011080:2761403*2761403277959918197Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-1695.6BLASTN svgBLASTP svg
NC_011740:45203734520373454479624424Escherichia fergusonii ATCC 35469, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008048:2838769*2838769286662127853Sphingopyxis alaskensis RB2256, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_009434:3413461*3413461343258419124Pseudomonas stutzeri A1501, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012660:819381*81938184312223742Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015733:864959*86495989931634358Pseudomonas putida S16 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_013456:145171*14517117166126491Vibrio sp. Ex25 chromosome 1, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_008027:896000*89600091964923650Pseudomonas entomophila L48, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_020064:3825916*3825916385292327008Serratia marcescens FGI94, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008258:1934479*1934479196306928591Shigella flexneri 5 str. 8401, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_003198:3881221*3881221390454423324Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-1283.8BLASTN svgBLASTP svg
NC_004431:1211000*1211000123322222223Escherichia coli CFT073, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007946:1119000*1119000114261923620Escherichia coli UTI89, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_013421:2613137*2613137263682223686Pectobacterium wasabiae WPP163, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_020211:29851572985157300925724101Serratia marcescens WW4, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_010995:2547164*2547164256843021267Cellvibrio japonicus Ueda107, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015061:3840463*3840463391463974177Rahnella sp. Y9602 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010995:764567*76456778991125345Cellvibrio japonicus Ueda107, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007912:41259704125970415108425115Saccharophagus degradans 2-40, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012587:1181004*1181004120298621983Rhizobium sp. NGR234, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013592:32128343212834324883336000Dickeya dadantii Ech586, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015593:2447844*2447844246959921756Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete4e-0971.9BLASTN svgBLASTP svg
NC_015740:15943761594376161634721972Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete4e-0971.9BLASTN svgBLASTP svg
NC_011149:30955630955633763728082Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-0869.9BLASTN svgBLASTP svg
NC_008563:20413452041345206368122337Escherichia coli APEC O1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008254:3246306*3246306327014823843Mesorhizobium sp. BNC1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007626:1746475*1746475178760841134Magnetospirillum magneticum AMB-1, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_009053:1785447*1785447180792922483Actinobacillus pleuropneumoniae L20, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_012587:2744731*2744731277030625576Rhizobium sp. NGR234, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_013592:80428880428883459430307Dickeya dadantii Ech586, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_016025:59667059667062579729128Candidatus Chloracidobacterium thermophilum B chromosome chromosome9e-0763.9BLASTN svgBLASTP svg
NC_004310:1777721*1777721180601328293Brucella suis 1330 chromosome I, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_007618:1792500*1792500182000027501Brucella melitensis biovar Abortus 2308 chromosome I, complete4e-0661.9BLASTN svgBLASTP svg
NC_009434:17436961743696176409920404Pseudomonas stutzeri A1501, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010103:1777000*1777000180418827189Brucella canis ATCC 23365 chromosome I, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_010169:1599936*1599936162443724502Brucella suis ATCC 23445 chromosome I, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_011080:27224922722492274217119680Salmonella enterica subsp. enterica serovar Newport str. SL254,4e-0661.9BLASTN svgBLASTP svg
NC_011985:3282924*3282924330901226089Agrobacterium radiobacter K84 chromosome 1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014972:3000138*3000138302046120324Desulfobulbus propionicus DSM 2032 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_003197:27207262720726274079420069Salmonella typhimurium LT2, complete genome4e-0661.9BLASTN svgBLASTP svg