Pre_GI: BLASTN Hits

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Query: NC_016830:81382 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 81382, End: 101099, Length: 19718

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,011460BLASTN svgBLASTP svg
NC_020209:4768500*4768500481226743768Pseudomonas poae RE*1-1-14, complete genome01826BLASTN svgBLASTP svg
NC_007508:4593446*4593446461871425269Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-127464BLASTN svgBLASTP svg
NC_003919:4568892*4568892459309924208Xanthomonas axonopodis pv. citri str. 306, complete genome6e-115422BLASTN svgBLASTP svg
NC_002977:92558892558894955323966Methylococcus capsulatus str. Bath, complete genome2e-87331BLASTN svgBLASTP svg
NC_008752:3902637*3902637393751334877Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-65258BLASTN svgBLASTP svg
NC_006351:730007300010112828129Burkholderia pseudomallei K96243 chromosome 2, complete sequence2e-40174BLASTN svgBLASTP svg
NC_007435:19143751914375195826743893Burkholderia pseudomallei 1710b chromosome II, complete sequence2e-40174BLASTN svgBLASTP svg
NC_009075:922109221012709934890Burkholderia pseudomallei 668 chromosome II, complete sequence2e-40174BLASTN svgBLASTP svg
NC_015379:67145456714545674216027616Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-40174BLASTN svgBLASTP svg
NC_009078:749547495410871533762Burkholderia pseudomallei 1106a chromosome II, complete sequence1e-35159BLASTN svgBLASTP svg
NC_014012:20728920728922623418946Shewanella violacea DSS12, complete genome2e-31145BLASTN svgBLASTP svg
NC_015138:5276857*5276857530246825612Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete5e-26127BLASTN svgBLASTP svg
NC_008752:5213431*5213431523609922669Acidovorax avenae subsp. citrulli AAC00-1, complete genome3e-24121BLASTN svgBLASTP svg
NC_015186:28848662884866290438219517Acidiphilium multivorum AIU301, complete genome5e-23117BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-19105BLASTN svgBLASTP svg
NC_008260:125500*12550014520219703Alcanivorax borkumensis SK2, complete genome7e-19103BLASTN svgBLASTP svg
NC_015379:42492384249238427562626389Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-1487.7BLASTN svgBLASTP svg
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007492:39543453954345399809943755Pseudomonas fluorescens PfO-1, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_007492:17355951735595175753521941Pseudomonas fluorescens PfO-1, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_011992:3615517*3615517363908923573Acidovorax ebreus TPSY, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-1281.8BLASTN svgBLASTP svg
NC_015730:1107840*1107840113310925270Roseobacter litoralis Och 149 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_008726:39159793915979394187225894Mycobacterium vanbaalenii PYR-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010172:575005750011716259663Methylobacterium extorquens PA1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014210:3763940*3763940379109927160Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-1179.8BLASTN svgBLASTP svg
NC_015671:15408601540860156478123922Cellvibrio gilvus ATCC 13127 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010617:14289021428902145226023359Kocuria rhizophila DC2201, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013854:2714033*2714033273463520603Azospirillum sp. B510, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015387:19657111965711198901123301Marinithermus hydrothermalis DSM 14884 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_003888:23059012305901232945223552Streptomyces coelicolor A3(2), complete genome2e-0971.9BLASTN svgBLASTP svg
NC_012803:13022611302261132380421544Micrococcus luteus NCTC 2665, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_013169:1661135*1661135168009918965Kytococcus sedentarius DSM 20547, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014831:19066911906691195238745697Thermaerobacter marianensis DSM 12885 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_015379:4282815*4282815430375120937Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-0971.9BLASTN svgBLASTP svg
NC_015594:579354*57935460476625413Sphingobium chlorophenolicum L-1 chromosome chromosome 2, complete9e-0969.9BLASTN svgBLASTP svg
NC_015556:18998501899850192183821989Pseudomonas fulva 12-X chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_012660:46695004669500468960120102Pseudomonas fluorescens SBW25 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007947:1556437*1556437158119324757Methylobacillus flagellatus KT, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_020054:1335699*1335699135810022402Fibrella aestuarina BUZ 2 drat genome1e-0765.9BLASTN svgBLASTP svg
NC_007484:3429140*3429140345349224353Nitrosococcus oceani ATCC 19707, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009664:37189273718927374705528129Kineococcus radiotolerans SRS30216, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012791:72181372181376114739335Variovorax paradoxus S110 chromosome 1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013441:27888062788806282218133376Gordonia bronchialis DSM 43247, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013510:1786194*1786194181369827505Thermomonospora curvata DSM 43183, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015379:1600715*1600715162682426110Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-0763.9BLASTN svgBLASTP svg
NC_015514:24146172414617243874024124Cellulomonas fimi ATCC 484 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015588:19657871965787198857522789Isoptericola variabilis 225 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_021177:19229301922930194704124112Streptomyces fulvissimus DSM 40593, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010175:29250842925084294710722024Chloroflexus aurantiacus J-10-fl, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_004129:57814135781413580497523563Pseudomonas fluorescens Pf-5, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013235:40455894045589406814822560Nakamurella multipartita DSM 44233, complete genome9e-0660BLASTN svgBLASTP svg