Pre_GI: BLASTN Hits

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Query: NC_016830:5994494 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 5994494, End: 6019187, Length: 24694

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,011170BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome02179BLASTN svgBLASTP svg
NC_009512:51664595166459519343626978Pseudomonas putida F1, complete genome02026BLASTN svgBLASTP svg
NC_020209:39737639737645309955724Pseudomonas poae RE*1-1-14, complete genome01778BLASTN svgBLASTP svg
NC_004129:62409046240904627459933696Pseudomonas fluorescens Pf-5, complete genome01530BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome01269BLASTN svgBLASTP svg
NC_004129:4993974*4993974502072326750Pseudomonas fluorescens Pf-5, complete genome0761BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome0708BLASTN svgBLASTP svg
NC_007484:3035068*3035068305935824291Nitrosococcus oceani ATCC 19707, complete genome0662BLASTN svgBLASTP svg
NC_015379:25750002575000259943424435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-144519BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-141511BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-103385BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome4e-98367BLASTN svgBLASTP svg
NC_008825:25649652564965258966024696Methylibium petroleiphilum PM1, complete genome9e-93349BLASTN svgBLASTP svg
NC_020064:521500*52150055828736788Serratia marcescens FGI94, complete genome1e-79305BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome7e-78299BLASTN svgBLASTP svg
NC_007651:3719191*3719191374181722627Burkholderia thailandensis E264 chromosome I, complete sequence7e-78299BLASTN svgBLASTP svg
NC_008789:1237969*1237969126209924131Halorhodospira halophila SL1, complete genome1e-76295BLASTN svgBLASTP svg
NC_004578:63347356334735636397929245Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-51212BLASTN svgBLASTP svg
NC_004578:48696734869673488861018938Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-48202BLASTN svgBLASTP svg
NC_008463:52469545246954530671059757Pseudomonas aeruginosa UCBPP-PA14, complete genome7e-44186BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome1e-42182BLASTN svgBLASTP svg
NC_012660:21433762143376220316659791Pseudomonas fluorescens SBW25 chromosome, complete genome1e-42182BLASTN svgBLASTP svg
NC_012660:33203303320330335044730118Pseudomonas fluorescens SBW25 chromosome, complete genome3e-40174BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome3e-40174BLASTN svgBLASTP svg
NC_008740:443274*44327451891675643Marinobacter aquaeolei VT8, complete genome4e-39170BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome7e-38167BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome7e-38167BLASTN svgBLASTP svg
NC_007963:2555012*2555012257573920728Chromohalobacter salexigens DSM 3043, complete genome3e-37165BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome3e-37165BLASTN svgBLASTP svg
NC_008740:25743425743428330125868Marinobacter aquaeolei VT8, complete genome1e-36163BLASTN svgBLASTP svg
NC_009937:4090404*4090404411705426651Azorhizobium caulinodans ORS 571, complete genome4e-36161BLASTN svgBLASTP svg
NC_007005:51543175154317518283828522Pseudomonas syringae pv. syringae B728a, complete genome2e-35159BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome7e-35157BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome3e-34155BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_015563:4911188*4911188493357422387Delftia sp. Cs1-4 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome4e-27131BLASTN svgBLASTP svg
NC_011901:62571262571266531339602Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete1e-26129BLASTN svgBLASTP svg
NC_014008:1463795*1463795148708323289Coraliomargarita akajimensis DSM 45221 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_014972:247028*24702827012323096Desulfobulbus propionicus DSM 2032 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_006512:696000*69600071719521196Idiomarina loihiensis L2TR, complete genome2e-19105BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_004578:20738207386960648869Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_009434:28147428147430109919626Pseudomonas stutzeri A1501, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008702:111506115061Azoarcus sp. BH72, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_004129:24407442440744246509824355Pseudomonas fluorescens Pf-5, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015663:2090442*2090442212127330832Enterobacter aerogenes KCTC 2190 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015556:819503*81950384290123399Pseudomonas fulva 12-X chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010831:78850078850081048421985Chlorobium phaeobacteroides BS1, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_009778:56700056700060530938310Enterobacter sakazakii ATCC BAA-894, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015576:14427131442713147609933387Mycobacterium sp. JDM601 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015434:4640769*4640769466756226794Verrucosispora maris AB-18-032 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008271:14084614084616654625701Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_014323:3292082*3292082331943527354Herbaspirillum seropedicae SmR1 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015379:42492384249238427562626389Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-1177.8BLASTN svgBLASTP svg
NC_018691:1322389*1322389134428821900Alcanivorax dieselolei B5 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_018691:18227311822731185319130461Alcanivorax dieselolei B5 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009049:1934398*1934398196979735400Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009434:17436961743696176409920404Pseudomonas stutzeri A1501, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_011666:1661491*1661491168514023650Methylocella silvestris BL2, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015740:15943761594376161634721972Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete8e-1073.8BLASTN svgBLASTP svg
NC_012779:25861752586175261323427060Edwardsiella ictaluri 93-146, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008340:2034810*2034810206790533096Alkalilimnicola ehrlichei MLHE-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009077:2308634*2308634235649847865Mycobacterium sp. JLS, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012559:18880001888000191471626717Laribacter hongkongensis HLHK9, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-0869.9BLASTN svgBLASTP svg
NC_018524:42357734235773425759921827Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008751:607209*60720963021323005Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007952:1293024*1293024131920626183Burkholderia xenovorans LB400 chromosome 2, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_007951:74050074050076287822379Burkholderia xenovorans LB400 chromosome 1, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_007951:22336762233676225569422019Burkholderia xenovorans LB400 chromosome 1, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_007519:28478162847816287465526840Desulfovibrio alaskensis G20 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009439:34850003485000350721722218Pseudomonas mendocina ymp, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012669:17006261700626173294232317Beutenbergia cavernae DSM 12333, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete7e-0763.9BLASTN svgBLASTP svg
NC_004369:41236*412366188820653Corynebacterium efficiens YS-314, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012559:13019881301988132559923612Laribacter hongkongensis HLHK9, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014926:1381152*1381152141251931368Thermovibrio ammonificans HB-1 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014960:34107413410741343484124101Anaerolinea thermophila UNI-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015953:47469834746983477386726885Streptomyces sp. SirexAA-E chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013862:27991279915399926009Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_006350:1084930*1084930112191036981Burkholderia pseudomallei K96243 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_005773:106000*10600015088044881Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-0661.9BLASTN svgBLASTP svg