Pre_GI: BLASTN Hits

Some Help

Query: NC_016830:5031819 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 5031819, End: 5053099, Length: 21281

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004129:22017802201780222535423575Pseudomonas fluorescens Pf-5, complete genome0908BLASTN svgBLASTP svg
NC_004578:38498353849835387260722773Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-164587BLASTN svgBLASTP svg
NC_005773:38514333851433386927817846Pseudomonas syringae pv. phaseolicola 1448A, complete genome6e-109402BLASTN svgBLASTP svg
NC_005773:32205003220500325277732278Pseudomonas syringae pv. phaseolicola 1448A, complete genome6e-109402BLASTN svgBLASTP svg
NC_005773:1851116*1851116187559924484Pseudomonas syringae pv. phaseolicola 1448A, complete genome6e-109402BLASTN svgBLASTP svg
NC_005773:21771842177184220009922916Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-106394BLASTN svgBLASTP svg
NC_007275:112112521125Pseudomonas syringae pv. phaseolicola 1448A small plasmid, complete1e-106394BLASTN svgBLASTP svg
NC_005773:4539751*4539751456760327853Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-104387BLASTN svgBLASTP svg
NC_005773:16757931675793169861222820Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-102379BLASTN svgBLASTP svg
NC_005773:106000*10600015088044881Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-102379BLASTN svgBLASTP svg
NC_005773:5310339*5310339533285822520Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-100375BLASTN svgBLASTP svg
NC_005773:57347335734733576109926367Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-94355BLASTN svgBLASTP svg
NC_012560:2348202*2348202238326135060Azotobacter vinelandii DJ, complete genome2e-77297BLASTN svgBLASTP svg
NC_021150:2348214*2348214238327335060Azotobacter vinelandii CA6, complete genome2e-77297BLASTN svgBLASTP svg
NC_002947:34040003404000342808524086Pseudomonas putida KT2440, complete genome1e-75291BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome6e-75289BLASTN svgBLASTP svg
NC_003296:55683655683661181954984Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete6e-41176BLASTN svgBLASTP svg
NC_003295:27173627173629326221527Ralstonia solanacearum GMI1000, complete genome6e-41176BLASTN svgBLASTP svg
NC_007347:24219422421942244414322202Ralstonia eutropha JMP134 chromosome 1, complete sequence4e-36161BLASTN svgBLASTP svg
NC_007973:49960649960652396824363Ralstonia metallidurans CH34 chromosome 1, complete sequence6e-35157BLASTN svgBLASTP svg
NC_010529:29650029650034723950740Cupriavidus taiwanensis plasmid pRALTA, complete sequence9e-31143BLASTN svgBLASTP svg
NC_010551:20079262007926203080722882Burkholderia ambifaria MC40-6 chromosome 1, complete sequence1e-29139BLASTN svgBLASTP svg
NC_008061:18642821864282188910424823Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence3e-27131BLASTN svgBLASTP svg
NC_008543:58212958212961104528917Burkholderia cenocepacia HI2424 chromosome 2, complete sequence3e-27131BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome3e-27131BLASTN svgBLASTP svg
NC_012856:737170*73717079740260233Ralstonia pickettii 12D chromosome 1, complete genome3e-27131BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete8e-22113BLASTN svgBLASTP svg
NC_015382:17221317221319334021128Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequence3e-21111BLASTN svgBLASTP svg
NC_005773:17688517688520456427680Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_005773:866157*86615792659960443Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015563:3979500*3979500400273623237Delftia sp. Cs1-4 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015563:35119513511951354146929519Delftia sp. Cs1-4 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009512:3618055*3618055363859920545Pseudomonas putida F1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009512:22384372238437226259924163Pseudomonas putida F1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010508:19806891980689200677326085Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_010512:110932*11093213790426973Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_010512:86693286693289209925168Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_014924:2840310*2840310286007019761Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007651:3064530*30645303173670109141Burkholderia thailandensis E264 chromosome I, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_007651:3560652*3560652359749336842Burkholderia thailandensis E264 chromosome I, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_007651:3719191*3719191374181722627Burkholderia thailandensis E264 chromosome I, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_008061:25820002582000260842826429Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_008543:26668462666846268814221297Burkholderia cenocepacia HI2424 chromosome 2, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_010515:67800067800069562617627Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_011979:11289861128986115470925724Geobacter sp. FRC-32, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-0661.9BLASTN svgBLASTP svg
NC_007650:42074542074544753126787Burkholderia thailandensis E264 chromosome II, complete sequence2e-0661.9BLASTN svgBLASTP svg