Pre_GI: BLASTN Hits

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Query: NC_016830:3697173 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3697173, End: 3742856, Length: 45684

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:31755003175500319347517976Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,07690BLASTN svgBLASTP svg
NC_010501:18688881868888190527536388Pseudomonas putida W619, complete genome02839BLASTN svgBLASTP svg
NC_009512:51664595166459519343626978Pseudomonas putida F1, complete genome01027BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome01011BLASTN svgBLASTP svg
NC_004129:31230003123000314059917600Pseudomonas fluorescens Pf-5, complete genome0957BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome0674BLASTN svgBLASTP svg
NC_007492:27710212771021280204831028Pseudomonas fluorescens PfO-1, complete genome6e-86327BLASTN svgBLASTP svg
NC_004578:1719849*1719849174221722369Pseudomonas syringae pv. tomato str. DC3000, complete genome9e-48200BLASTN svgBLASTP svg
NC_012796:12950012950014715917660Desulfovibrio magneticus RS-1, complete genome1e-46196BLASTN svgBLASTP svg
NC_003295:19935419935423823938886Ralstonia solanacearum GMI1000, complete genome9e-45190BLASTN svgBLASTP svg
NC_002488:16389461638946170065561710Xylella fastidiosa 9a5c, complete genome2e-42182BLASTN svgBLASTP svg
NC_015379:42492384249238427562626389Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-37165BLASTN svgBLASTP svg
NC_010002:15845001584500161170527206Delftia acidovorans SPH-1, complete genome2e-36163BLASTN svgBLASTP svg
NC_007005:45158534515853454582229970Pseudomonas syringae pv. syringae B728a, complete genome2e-30143BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-29139BLASTN svgBLASTP svg
NC_004431:364000*36400042492660927Escherichia coli CFT073, complete genome2e-24123BLASTN svgBLASTP svg
NC_007946:289425*28942536040270978Escherichia coli UTI89, complete genome2e-24123BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome2e-24123BLASTN svgBLASTP svg
NC_008563:318993*31899336258343591Escherichia coli APEC O1, complete genome2e-24123BLASTN svgBLASTP svg
NC_008786:2687688*2687688271388926202Verminephrobacter eiseniae EF01-2, complete genome2e-24123BLASTN svgBLASTP svg
NC_010498:301000*30100034338442385Escherichia coli SMS-3-5, complete genome2e-24123BLASTN svgBLASTP svg
NC_011751:348000*34800037070122702Escherichia coli UMN026 chromosome, complete genome2e-24123BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome7e-24121BLASTN svgBLASTP svg
NC_011740:27374672737467275914021674Escherichia fergusonii ATCC 35469, complete genome4e-22115BLASTN svgBLASTP svg
NC_016047:637778*63777866096423187Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete6e-21111BLASTN svgBLASTP svg
NC_008463:1912348*1912348195418241835Pseudomonas aeruginosa UCBPP-PA14, complete genome6e-21111BLASTN svgBLASTP svg
NC_012660:46695004669500468960120102Pseudomonas fluorescens SBW25 chromosome, complete genome3e-20109BLASTN svgBLASTP svg
NC_011386:1727203*1727203175090123699Oligotropha carboxidovorans OM5, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010625:14656031465603148359917997Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence2e-1799.6BLASTN svgBLASTP svg
NC_008752:2334511*2334511236012625616Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_002516:24363042436304246509928796Pseudomonas aeruginosa PAO1, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-1591.7BLASTN svgBLASTP svg
NC_006396:2057209*2057209208818030972Haloarcula marismortui ATCC 43049 chromosome I, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_015663:37427383742738376655823821Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_020181:1653261*1653261168347330213Enterobacter aerogenes EA1509E, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_015740:11063311063313313122499Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete6e-1281.8BLASTN svgBLASTP svg
NC_008313:19910001991000200925118252Ralstonia eutropha H16 chromosome 1, complete sequence6e-1281.8BLASTN svgBLASTP svg
NC_008095:20715002071500210351032011Myxococcus xanthus DK 1622, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_010805:530876*53087656144030565Burkholderia multivorans ATCC 17616 chromosome 2, complete9e-1177.8BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,9e-1177.8BLASTN svgBLASTP svg
NC_010086:1907959*1907959194027532317Burkholderia multivorans ATCC 17616 chromosome 2, complete9e-1177.8BLASTN svgBLASTP svg
NC_005363:35622053562205359309930895Bdellovibrio bacteriovorus HD100, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_008390:987052987052101116924118Burkholderia cepacia AMMD chromosome 1, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_015556:13043713043716194631510Pseudomonas fulva 12-X chromosome, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_003902:2469500*2469500250580636307Xanthomonas campestris pv. campestris str. ATCC 33913, complete6e-0971.9BLASTN svgBLASTP svg
NC_008345:37569773756977377563418658Shewanella frigidimarina NCIMB 400, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009997:26996442699644272218322540Shewanella baltica OS195, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009997:51882215188221522795839738Shewanella baltica OS195, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009999:38832388326239723566Shewanella baltica OS195 plasmid pS19502, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_014973:3290545*3290545331870328159Geobacter sp. M18 chromosome, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_014532:75280775280777109918293Halomonas elongata DSM 2581, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_013446:1173377*1173377119764624270Comamonas testosteroni CNB-2, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_004129:5723787*5723787575817934393Pseudomonas fluorescens Pf-5, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007705:15833731583373160836624994Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008358:1789816*1789816181807328258Hyphomonas neptunium ATCC 15444, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014006:3124818*3124818317034545528Sphingobium japonicum UT26S chromosome 1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015556:18998501899850192183821989Pseudomonas fulva 12-X chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008786:14279714279716109918303Verminephrobacter eiseniae EF01-2, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015379:25052332505233254669441462Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-0661.9BLASTN svgBLASTP svg
NC_013889:32511832511834919724080Thioalkalivibrio sp. K90mix chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009943:97090197090199500524105Candidatus Desulfococcus oleovorans Hxd3, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008043:167108*16710818932022213Silicibacter sp. TM1040 mega plasmid, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_007760:36554333655433369618740755Anaeromyxobacter dehalogenans 2CP-C, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome5e-0661.9BLASTN svgBLASTP svg