Pre_GI: BLASTN Hits

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Query: NC_016830:3230939 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3230939, End: 3261397, Length: 30459

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:3736500*3736500376722330724Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,035460BLASTN svgBLASTP svg
NC_015733:27201832720183276059940417Pseudomonas putida S16 chromosome, complete genome5e-138500BLASTN svgBLASTP svg
NC_012660:21433762143376220316659791Pseudomonas fluorescens SBW25 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,7e-20107BLASTN svgBLASTP svg
NC_005296:5238882*5238882526489126010Rhodopseudomonas palustris CGA009, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_005773:32535753253575328174728173Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_007519:3240864*3240864326641325550Desulfovibrio alaskensis G20 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008027:29090002909000292988020881Pseudomonas entomophila L48, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008740:3602367*3602367362072718361Marinobacter aquaeolei VT8, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_004578:11537381153738117268818951Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_008786:39150003915000394226927270Verminephrobacter eiseniae EF01-2, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011769:24720224720227380526604Desulfovibrio vulgaris str. 'Miyazaki F', complete genome4e-1281.8BLASTN svgBLASTP svg
NC_008786:17673151767315179053023216Verminephrobacter eiseniae EF01-2, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014500:1862000*1862000191726855269Dickeya dadantii 3937 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015424:4251369*4251369427627324905Aeromonas veronii B565 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015656:1830220*1830220184914718928Frankia symbiont of Datisca glomerata chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015410:96952696952699007820553Pseudomonas mendocina NK-01 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014098:29710112971011299873827728Bacillus tusciae DSM 2912 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011004:5520771*5520771554678126011Rhodopseudomonas palustris TIE-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009439:79449879449881473720240Pseudomonas mendocina ymp, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007492:33328393332839335417921341Pseudomonas fluorescens PfO-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008786:3323167*3323167337505651890Verminephrobacter eiseniae EF01-2, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_009348:2631759*2631759265138819630Aeromonas salmonicida subsp. salmonicida A449, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_013854:3200912*3200912322443023519Azospirillum sp. B510, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014963:76703476703479552128488Terriglobus saanensis SP1PR4 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_006155:34564883456488347575719270Yersinia pseudotuberculosis IP 32953, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008463:2654014*2654014267605522042Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010634:33680003368000339029322294Yersinia pseudotuberculosis PB1/+, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012779:2281700*2281700230559923900Edwardsiella ictaluri 93-146, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004578:21859072185907220851022604Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_007005:40623114062311408347221162Pseudomonas syringae pv. syringae B728a, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_007492:38012373801237381978618550Pseudomonas fluorescens PfO-1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008435:2658986*2658986275828699301Rhodopseudomonas palustris BisA53, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008570:1094442*1094442111732922888Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012796:2683711*2683711270614022430Desulfovibrio magneticus RS-1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_003143:29922952992295301138119087Yersinia pestis CO92, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004088:13872761387276140629619021Yersinia pestis KIM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005810:27398782739878276387423997Yersinia pestis biovar Microtus str. 91001, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008149:13171091317109134111024002Yersinia pestis Nepal516, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008150:26813272681327270532824002Yersinia pestis Antiqua, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008700:1115436*1115436114339927964Shewanella amazonensis SB2B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010159:37791293779129380108621958Yersinia pestis Angola, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010465:12730001273000129080517806Yersinia pseudotuberculosis YPIII, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007626:35222653522265361842896164Magnetospirillum magneticum AMB-1, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007644:362000*36200039425132252Moorella thermoacetica ATCC 39073, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_013406:35214893521489357006948581Paenibacillus sp. Y412MC10 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015224:3225000*3225000325159926600Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,9e-0763.9BLASTN svgBLASTP svg
NC_015424:1603000*1603000163382230823Aeromonas veronii B565 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_004459:20254362025436205524629811Vibrio vulnificus CMCP6 chromosome I, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_008391:12104511210451123772327273Burkholderia cepacia AMMD chromosome 2, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_008570:3083850*3083850310907525226Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_016002:1326500*1326500135490028401Pseudogulbenkiania sp. NH8B, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_003296:55683655683661181954984Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete4e-0661.9BLASTN svgBLASTP svg