Pre_GI: BLASTP Hits

Some Help

Query: NC_016830:952342:980443 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 980443, End: 980748, Length: 306

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:212468:239314239314239619306Pseudomonas syringae pv. tomato str. DC3000, complete genomevirulence-associated protein, putative2e-32137
NC_012969:2476318:250078525007852501090306Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeXRE family plasmid maintenance system antidote protein2e-21100
NC_007517:3344799:335968033596803359985306Geobacter metallireducens GS-15, complete genomeplasmid maintenance system antidote protein, XRE family2e-2097.4
NC_013889:216829:231369231369231668300Thioalkalivibrio sp. K90mix chromosome, complete genomeplasmid maintenance system antidote protein, XRE family8e-2095.5
NC_008740:3520500:354310635431063543420315Marinobacter aquaeolei VT8, complete genomeplasmid maintenance system antidote protein, XRE family2e-1994.4
NC_017506:4380196:440068344006834400982300Marinobacter adhaerens HP15 chromosome, complete genomeplasmid maintenance system antidote protein5e-1992.8
NC_011901:39215:436174361743916300Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeXRE family transcriptional regulator9e-1889
NC_016629:3789554:382642838264283826736309Desulfovibrio africanus str. Walvis Bay chromosome, completeplasmid maintenance system antidote protein2e-1684
NC_011979:2969969:299132529913252991630306Geobacter sp. FRC-32, complete genomeplasmid maintenance system antidote protein, XRE family3e-1580.5
NC_014221:1518583:153149315314931531801309Truepera radiovictrix DSM 17093 chromosome, complete genomeplasmid maintenance system antidote protein, XRE family3e-1580.5
NC_011769:2016000:204183120418312042136306Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeplasmid maintenance system antidote protein, XRE family3e-1477
NC_011666:2259447:228055822805582280839282Methylocella silvestris BL2, complete genomeplasmid maintenance system antidote protein, XRE family3e-1477
NC_002937:1764117:180123418012341801539306Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeDNA-binding protein4e-1476.6
NC_009142:949510:953420953420953719300Saccharopolyspora erythraea NRRL 2338, complete genomeplasmid maintenance system antidote protein7e-1475.9
NC_007626:697926:712501712501712788288Magnetospirillum magneticum AMB-1, complete genomePlasmid maintenance system antidote protein1e-1375.5
NC_013174:815155:828461828461828763303Jonesia denitrificans DSM 20603, complete genomeplasmid maintenance system antidote protein, XRE family1e-1375.1
NC_014761:2248000:224929522492952249597303Oceanithermus profundus DSM 14977 chromosome, complete genomeplasmid maintenance system antidote protein, xre family7e-1372.8
NC_016609:4233701:426360942636094263989381Niastella koreensis GR20-10 chromosome, complete genomeplasmid maintenance system antidote protein6e-1372.8
NC_008536:2961460:297454929745492974878330Solibacter usitatus Ellin6076, complete genomeplasmid maintenance system antidote protein, XRE family1e-1272
NC_015125:3284095:329968632996863299988303Microbacterium testaceum StLB037, complete genomeplasmid maintenance system antidote protein3e-1270.5
NC_017271:4852351:487060048706004870890291Xanthomonas campestris pv. raphani 756C chromosome, completeHigA family addiction module antidote protein3e-1270.5
NC_003902:4989855:500635450063545006644291Xanthomonas campestris pv. campestris str. ATCC 33913, completevirulence associated protein6e-1269.7
NC_007086:5064053:507903950790395079329291Xanthomonas campestris pv. campestris str. 8004, complete genomevirulence associated protein6e-1269.7
NC_011901:2914000:292741029274102927730321Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeXRE family transcriptional regulator7e-1269.3
NC_004369:3027539:303409030340903034425336Corynebacterium efficiens YS-314, complete genomeputative virulence-associated protein8e-1268.9
NC_008571:938835:101154410115441011843300Gramella forsetii KT0803, complete genomeplasmid maintenance system antidote protein3e-1167.4
NC_015673:1794590:181670918167091817008300Corynebacterium resistens DSM 45100 chromosome, complete genomehypothetical protein4e-1166.6
NC_009937:958576:973552973552973860309Azorhizobium caulinodans ORS 571, complete genomehypothetical protein5e-1166.2
NC_010995:4297361:431725843172584317575318Cellvibrio japonicus Ueda107, complete genomehelix-turn-helix domain protein5e-1166.2
NC_014643:609544:618849618849619109261Rothia dentocariosa ATCC 17931 chromosome, complete genomeHigA family addiction module antidote protein7e-1165.9
NC_013861:728648:743379743379743672294Legionella longbeachae NSW150, complete genomeHypothetical Protein with Helix-turn-helix motif7e-1165.9
NC_015563:3511951:351478035147803515082303Delftia sp. Cs1-4 chromosome, complete genomeXRE family plasmid maintenance system antidote protein7e-1165.9
NC_011060:2099255:212090821209082121228321Pelodictyon phaeoclathratiforme BU-1, complete genomeplasmid maintenance system antidote protein, XRE family3e-1063.9
NC_015694:48344:614961496463315Runella slithyformis DSM 19594 plasmid pRUNSL03, complete sequenceplasmid maintenance system antidote protein, XRE family4e-1063.2
NC_012108:1067876:107674710767471077058312Desulfobacterium autotrophicum HRM2, complete genomeplasmid maintenance system antidote protein (HTH-type transcriptional regulator family protein)6e-1062.8
NC_010617:774914:785481785481785807327Kocuria rhizophila DC2201, complete genomeXre family DNA-binding protein1e-0962
NC_008358:2808299:282618928261892826482294Hyphomonas neptunium ATCC 15444, complete genomeaddiction module antidote protein, HigA family1e-0962
NC_020156:3670500:367855636785563678858303Nonlabens dokdonensis DSW-6, complete genomeplasmid maintenance system antidote protein2e-0960.8
NC_011060:2525367:253130225313022531688387Pelodictyon phaeoclathratiforme BU-1, complete genomeplasmid maintenance system antidote protein, XRE family2e-0960.8
NC_013174:815155:818269818269818622354Jonesia denitrificans DSM 20603, complete genomeplasmid maintenance system antidote protein, XRE family2e-0960.8
NC_014973:243000:250913250913251218306Geobacter sp. M18 chromosome, complete genomeXRE family plasmid maintenance system antidote protein3e-0960.5
NC_010602:2244729:231241723124172312758342Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'putative lambda repressor-like DNA-binding protein8e-0959.3
NC_010842:2310756:231780323178032318144342Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeplasmid maintenance system antidote protein8e-0959.3
NC_016026:1760856:176525417652541765556303Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeHigA family addiction module antidote protein7e-0959.3
NC_014562:1772842:179353317935331793910378Pantoea vagans C9-1 chromosome, complete genomeUncharacterized HTH-type transcriptional regulator ybaQ9e-0958.9
NC_010602:2244729:232945723294572329762306Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'putative plasmid maintenance system antidote-like protein1e-0858.5
NC_010842:2310756:233484423348442335149306Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeplasmid maintenance system antidote protein1e-0858.5
NC_014973:5099543:510360051036005103914315Geobacter sp. M18 chromosome, complete genomeXRE family plasmid maintenance system antidote protein1e-0858.2
NC_009943:1637582:164721016472101647521312Candidatus Desulfococcus oleovorans Hxd3, complete genomeplasmid maintenance system antidote protein, XRE family2e-0857.8
NC_011146:2200142:220804622080462208348303Geobacter bemidjiensis Bem, complete genomeplasmid maintenance system antidote protein, XRE family3e-0857.4
NC_007643:3799425:381628338162833816618336Rhodospirillum rubrum ATCC 11170, complete genomePlasmid maintenance system antidote protein2e-0857.4
NC_008751:1736512:175481817548181755120303Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeplasmid maintenance system antidote protein, XRE family9e-0855.8
NC_015160:63500:739707397074287318Odoribacter splanchnicus DSM 20712 chromosome, complete genomeplasmid maintenance system antidote protein, XRE family9e-0855.5
NC_016446:49618:947919479195108318Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein2e-0754.7
NC_012667:931390:991679991679991996318Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-0754.7
NC_012583:335000:353675353675353992318Vibrio cholerae O395 chromosome chromosome II, complete sequenceantidote protein, putative2e-0754.7
NC_012580:353273:373272373272373589318Vibrio cholerae M66-2 chromosome II, complete sequenceantidote protein2e-0754.7
NC_012580:353273:356234356234356551318Vibrio cholerae M66-2 chromosome II, complete sequenceantidote protein2e-0754.7
NC_013889:1740858:175184017518401752157318Thioalkalivibrio sp. K90mix chromosome, complete genomeplasmid maintenance system antidote protein, XRE family3e-0753.9
NC_011757:1121262:113548011354801135839360Methylobacterium chloromethanicum CM4, complete genomeplasmid maintenance system antidote protein, XRE family6e-0752.8
NC_013173:2884887:293123329312332931562330Desulfomicrobium baculatum DSM 4028, complete genomeplasmid maintenance system antidote protein, XRE family7e-0752.8
NC_014722:1467996:147187714718771472230354Burkholderia rhizoxinica HKI 454, complete genomevirulence-associated protein A9e-0752.4
NC_007508:5093365:511545851154585115748291Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative DNA-binding protein1e-0651.6
NC_014972:210500:219991219991220326336Desulfobulbus propionicus DSM 2032 chromosome, complete genomeplasmid maintenance system antidote protein, XRE family2e-0651.2
NC_012962:1827000:184365418436541843959306Photorhabdus asymbiotica, complete genomehypothetical protein3e-0650.8
NC_009483:4434375:446194244619424462226285Geobacter uraniireducens Rf4 chromosome, complete genomeXRE family plasmid maintenance system antidote protein1e-0548.9