Pre_GI: BLASTP Hits

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Query: NC_016830:530397:539485 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 539485, End: 540699, Length: 1215

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010322:6037566:6047157604715760483801224Pseudomonas putida GB-1 chromosome, complete genomemajor facilitator superfamily transporter1e-142506
NC_008463:4743296:4767825476782547690721248Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable MFS transporter5e-103374
NC_014103:3212839:3224267322426732254871221Bacillus megaterium DSM319 chromosome, complete genomemajor facilitator superfamily protein1e-41170
NC_017138:1812000:181609418160941816642549Bacillus megaterium WSH-002 chromosome, complete genomeMajor facilitator family transporter1e-23110
NC_003305:922357:9253619253619266171257Agrobacterium tumefaciens str. C58 chromosome linear, completeMFS permease2e-1584.3
NC_003063:1128370:1148139114813911493951257Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein2e-1584.3