Pre_GI: BLASTP Hits

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Query: NC_016830:4999946:5008867 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 5008867, End: 5010888, Length: 2022

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010501:734363:7534567534567554772022Pseudomonas putida W619, complete genomehypothetical protein01136
NC_014664:1614568:1621363162136316233571995Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomehypothetical protein1e-94348
NC_008782:2326439:2331946233194623339011956Acidovorax sp. JS42, complete genomeDNA mismatch repair enzyme (predicted ATPase)-like protein5e-94345
NC_014365:2843126:2860374286037428623621989Desulfarculus baarsii DSM 2075 chromosome, complete genomeATP-binding region ATPase domain protein1e-92341
NC_008554:4699577:4706059470605947080471989Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein2e-92340
NC_008786:1298817:1310843131084313128582016Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein8e-91335
NC_009972:606393:6152466152466170751830Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomehypothetical protein2e-48194
NC_014216:2538500:2548174254817425498381665Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeATP-binding region ATPase domain protein9e-41169
NC_005773:4282840:4297528429752842990121485Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein3e-1481.3
NC_006512:2789098:2803552280355228057892238Idiomarina loihiensis L2TR, complete genomePredicted signaling protein with an ATPase domain4e-1377
NC_011662:1041725:1056230105623010579931764Thauera sp. MZ1T, complete genomehypothetical protein5e-1170.1
NC_005090:1812833:1821440182144018237252286Wolinella succinogenes DSM 1740, complete genomeHYPOTHETICAL PROTEIN-Signal transduction histidine kinase6e-1169.7
NC_011000:2732330:2763339276333927645621224Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein7e-1066.2
NC_016943:1442885:1456441145644114588042364Blastococcus saxobsidens DD2, complete genomeputative Signal transduction histidine kinase2e-0964.7
NC_014158:1651326:1660655166065516627512097Tsukamurella paurometabola DSM 20162 chromosome, complete genomehypothetical protein6e-0963.2
NC_008095:4189082:4206674420667442088242151Myxococcus xanthus DK 1622, complete genomeputative sensor histidine kinase1e-0862
NC_010814:243384:2723732723732753572985Geobacter lovleyi SZ, complete genomehistidine kinase1e-0862
NC_021150:3667176:3675813367581336779842172Azotobacter vinelandii CA6, complete genomeATP binding/ATPase (HATPase c) domain-containing protein1e-0862
NC_012560:3667177:3675814367581436779852172Azotobacter vinelandii DJ, complete genomeATP binding/ATPase (HATPase_c) domain-containing protein1e-0862
NC_008800:1870596:1879424187942418818022379Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative prophage encoded two-component system histidine kinase2e-0861.2
NC_016109:3963189:3971787397178739740512265Kitasatospora setae KM-6054, complete genomeputative two-component system sensor kinase3e-0860.8
NC_016582:7033000:7040906704090670431462241Streptomyces bingchenggensis BCW-1 chromosome, complete genomehistidine kinase3e-0860.8
NC_013440:5543667:5553894555389455562152322Haliangium ochraceum DSM 14365, complete genomehistidine kinase4e-0860.5
NC_016111:3052494:3074328307432830765682241Streptomyces cattleya NRRL 8057, complete genomeSensor histidine kinase6e-0860.1
NC_008253:4735418:4776299477629947792592961Escherichia coli 536, complete genomehypothetical protein1e-0758.9
NC_002696:1154996:1161043116104311628991857Caulobacter crescentus CB15, complete genomehypothetical protein1e-0758.9
NC_011916:1180973:1186885118688511888761992Caulobacter crescentus NA1000 chromosome, complete genomehypothetical protein1e-0758.5
NC_014972:1126426:1150908115090811526711764Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein4e-0757.4
NC_014655:424486:4401784401784424962319Leadbetterella byssophila DSM 17132 chromosome, complete genomehistidine kinase5e-0757
NC_009381:3680638:3697940369794036990491110Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-0757
NC_002937:1764117:1813416181341618163612946Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein5e-0756.6
NC_011958:923789:9383399383399402431905Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein9e-0756.2
NC_014923:2888723:2895688289568828986692982Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeATP-binding region ATPase domain protein1e-0655.5
NC_003295:3688000:3705826370582637078292004Ralstonia solanacearum GMI1000, complete genomehypothetical protein1e-0655.5
NC_013850:4829455:4843123484312348454142292Klebsiella variicola At-22 chromosome, complete genomehistidine kinase1e-0655.5
NC_009485:1222697:1229626122962612325412916Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein2e-0655.1
NC_016612:5231065:5244589524458952475822994Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-0655.1
NC_008702:369965:3809343809343831892256Azoarcus sp. BH72, complete genomeputative two-component sensor kinase2e-0655.1
NC_016901:414670:4213544213544243232970Shewanella baltica OS678 chromosome, complete genomehistidine kinase3e-0654.7
NC_009997:415808:4224924224924254612970Shewanella baltica OS195, complete genomehistidine kinase3e-0654.7
NC_007964:4157500:4163252416325241660922841Nitrobacter hamburgensis X14, complete genomehistidine kinase4e-0653.9
NC_011884:1413831:1420359142035914224132055Cyanothece sp. PCC 7425, complete genomehistidine kinase5e-0653.5
NC_009656:2512733:2522554252255425248782325Pseudomonas aeruginosa PA7 chromosome, complete genomeputative prophage encoded two-component system histidine kinase5e-0653.5