Pre_GI: BLASTP Hits

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Query: NC_016830:4914406:4915794 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4915794, End: 4916543, Length: 750

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:5002595:500398250039825004797816Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein; putative exported protein1e-110398
NC_016613:2759908:278215427821542782870717Vibrio sp. EJY3 chromosome 1, complete sequenceFlp pilus assembly protein CpaB3e-32138
NC_010334:2749250:276520927652092766021813Shewanella halifaxensis HAW-EB4, complete genomeSAF domain protein3e-30132
NC_009831:2884851:288634328863432887167825Shewanella sediminis HAW-EB3, complete genomeFlp pilus assembly protein CpaB-like protein4e-29128
NC_009901:2427291:243823124382312439049819Shewanella pealeana ATCC 700345, complete genomeSAF domain protein2e-28125
NC_002932:440191:448662448662449498837Chlorobium tepidum TLS, complete genomehypothetical protein5e-1994.7
NC_016002:2453919:248796324879632488814852Pseudogulbenkiania sp. NH8B, complete genomeFlp pilus assembly protein CpaB4e-1892
NC_007614:2675302:268803526880352688820786Nitrosospira multiformis ATCC 25196 chromosome 1, completeFlp pilus assembly CpaB1e-1686.7
NC_008536:5259438:527804752780475278949903Solibacter usitatus Ellin6076, complete genomeSAF domain2e-1686.3
NC_011894:2618951:265212926521292653052924Methylobacterium nodulans ORS 2060, complete genomeFlp pilus assembly protein CpaB5e-1684.7
NC_008609:2933468:294536229453622946237876Pelobacter propionicus DSM 2379, complete genomeSAF domain1e-1584
NC_013223:1349000:137266213726621373549888Desulfohalobium retbaense DSM 5692, complete genomeFlp pilus assembly protein CpaB4e-1375.1
NC_009511:5362705:536505753650575366055999Sphingomonas wittichii RW1 chromosome, complete genomeSAF domain-containing protein1e-1066.6
NC_007794:1553000:155982215598221560604783Novosphingobium aromaticivorans DSM 12444, complete genomeFlp pilus assembly CpaB3e-1065.9
NC_010718:2460893:246659024665902467291702Natranaerobius thermophilus JW/NM-WN-LF, complete genomeFlp pilus assembly protein CpaB1e-0757
NC_011894:3885490:390345339034533904247795Methylobacterium nodulans ORS 2060, complete genomeFlp pilus assembly protein CpaB8e-0754.3