Pre_GI: BLASTP Hits

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Query: NC_016830:4809210:4824118 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4824118, End: 4824807, Length: 690

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:2034500:204108120410812041770690Pseudomonas fluorescens Pf-5, complete genomeenoyl-CoA hydratase8e-119426
NC_009439:2337024:233702423370242337713690Pseudomonas mendocina ymp, complete genomeenoyl-CoA hydratase1e-108392
NC_007005:2149275:215037021503702151059690Pseudomonas syringae pv. syringae B728a, complete genomeenoyl-CoA hydratase1e-106385
NC_012660:5121219:513534451353445136036693Pseudomonas fluorescens SBW25 chromosome, complete genomeenoyl-CoA hydratase2e-105381
NC_015410:2838132:286070628607062861395690Pseudomonas mendocina NK-01 chromosome, complete genomeenoyl-CoA hydratase3e-104377
NC_014472:3530274:354031935403193541092774Flavobacteriales bacterium HTCC2170 chromosome, complete genomehypothetical protein6e-1787.8
NC_015563:4206112:421556942155694216345777Delftia sp. Cs1-4 chromosome, complete genomeenoyl-CoA hydratase/isomerase4e-1478.6
NC_007333:1743890:178047017804701781141672Thermobifida fusca YX, complete genomeputative enoyl-CoA hydratase/isomerase family protein1e-1170.1
NC_010516:3466000:347929234792923480074783Clostridium botulinum B1 str. Okra, complete genome3-hydroxybutyryl-CoA dehydratase2e-1168.9
NC_009698:3275839:328407632840763284858783Clostridium botulinum A str. Hall chromosome, complete genome3-hydroxybutyryl-CoA dehydratase2e-1169.3
NC_007503:1111457:115099311509931151766774Carboxydothermus hydrogenoformans Z-2901, complete genome3-hydroxybutyryl-CoA dehydratase4e-1065.1
NC_015312:681678:702173702173702925753Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeenoyl-CoA hydratase/isomerase1e-0963.2
NC_002754:1811500:183162918316291832441813Sulfolobus solfataricus P2, complete genomeEnoyl CoA hydratase (paaF-4)3e-0962.4
NC_015738:1925997:193751919375191938304786Eggerthella sp. YY7918, complete genomehypothetical protein3e-0962
NC_003911:1791878:179441717944171795202786Silicibacter pomeroyi DSS-3, complete genomeenoyl-CoA hydratase3e-0962
NC_012726:701067:718891718891719694804Sulfolobus islandicus M.16.4 chromosome, complete genomeEnoyl-CoA hydratase/isomerase5e-0961.2
NC_020829:4429435:4439128443912844412392112Pseudomonas denitrificans ATCC 13867, complete genomeshort chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase7e-0960.8
NC_013892:114884:125205125205125978774Xenorhabdus bovienii SS-2004 chromosome, complete genomeenoyl-CoA hydratase-isomerase, phenylacetic acid degradation (strain W)8e-0960.8
NC_015976:814922:834922834922835755834Sphingobium sp. SYK-6, complete genomeferuloyl-CoA hydratase/lyase2e-0859.7
NC_014729:1185294:1190375119037511923541980Halogeometricum borinquense DSM 11551 chromosome, complete genome3-hydroxyacyl-CoA dehydrogenase; short chain enoyl-CoA hydratase2e-0859.3
NC_011969:4235818:424419442441944244970777Bacillus cereus Q1 chromosome, complete genomeenoyl-CoA hydratase5e-0858.2
NC_011658:4301633:431136543113654312141777Bacillus cereus AH187 chromosome, complete genomeenoyl-CoA hydratase5e-0858.2
NC_005957:4311679:432141143214114322187777Bacillus thuringiensis serovar konkukian str. 97-27, completeenoyl-CoA hydratase5e-0858.2
NC_018681:867230:8708318708318729872157Nocardia brasiliensis ATCC 700358 chromosome, complete genomeacyl-CoA dehydrogenase7e-0857.8
NC_009617:385000:387416387416388201786Clostridium beijerinckii NCIMB 8052 chromosome, complete genome3-hydroxybutyryl-CoA dehydratase1e-0756.6
NC_014259:3984568:400603540060354006808774Acinetobacter sp. DR1 chromosome, complete genomeenoyl-CoA hydratase1e-0756.6
NC_003364:1463317:148142114814211482269849Pyrobaculum aerophilum str. IM2, complete genomeenoyl-CoA hydratase2e-0756.2
NC_015576:3976679:403398640339864034756771Mycobacterium sp. JDM601 chromosome, complete genomeenoyl-CoA hydratase EchA83e-0755.5
NC_011768:79297:829568295683726771Desulfatibacillum alkenivorans AK-01, complete genomeEnoyl-CoA hydratase/isomerase3e-0755.5
NC_013791:2273389:228191722819172282699783Bacillus pseudofirmus OF4 chromosome, complete genomeenoyl-CoA hydratase3e-0755.5
NC_014118:1083492:110560411056041106404801Burkholderia sp. CCGE1002 chromosome chromosome 2, completeEnoyl-CoA hydratase/isomerase4e-0755.1
NC_007484:882341:8997648997649017822019Nitrosococcus oceani ATCC 19707, complete genome3-hydroxyacyl-CoA dehydrogenase4e-0755.1
NC_014220:481923:492703492703493482780Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeEnoyl-CoA hydratase/isomerase4e-0755.1
NC_008687:133728:138930138930139730801Paracoccus denitrificans PD1222 chromosome 2, complete sequenceEnoyl-CoA hydratase/isomerase4e-0755.1
NC_021182:1473535:147941914794191480207789Clostridium pasteurianum BC1, complete genomeenoyl-CoA hydratase/carnithine racemase5e-0754.7
NC_008740:1635137:163885616388561639647792Marinobacter aquaeolei VT8, complete genomeEnoyl-CoA hydratase/isomerase5e-0754.7
NC_014315:2485527:2485527248552724875452019Nitrosococcus watsoni C-113 chromosome, complete genome3-hydroxyacyl-CoA dehydrogenase NAD-binding protein6e-0754.3
NC_008262:2498000:251139525113952512177783Clostridium perfringens SM101, complete genome3-hydroxybutyryl-CoA dehydratase7e-0754.3
NC_009720:1006201:1027725102772510297852061Xanthobacter autotrophicus Py2, complete genome3-hydroxyacyl-CoA dehydrogenase NAD-binding7e-0754.3
NC_008687:388262:3882623882623905592298Paracoccus denitrificans PD1222 chromosome 2, complete sequence3-hydroxyacyl-CoA dehydrogenase, NAD-binding7e-0754.3
NC_007181:2054663:2061332206133220632511920Sulfolobus acidocaldarius DSM 639, complete genomeconserved 3-hydroxybutyryl-CoA1e-0653.5
NC_004557:2552418:256657725665772567359783Clostridium tetani E88, complete genomeenoyl-CoA hydratase1e-0653.5
NC_017904:2641270:264678226467822647450669Mycobacterium sp. MOTT36Y chromosome, complete genomeenoyl-CoA hydratase1e-0653.5
NC_015458:3390674:3399313339931334014032091Pusillimonas sp. T7-7 chromosome, complete genomefatty oxidation complex, alpha subunit1e-0653.1
NC_020291:491000:501608501608502393786Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome3-hydroxybutyryl-CoA dehydratase Crt2e-0652.4
NC_013421:1545386:1565480156548015676632184Pectobacterium wasabiae WPP163, complete genomefatty acid oxidation complex, alpha subunit FadJ3e-0652
NC_015573:813000:856359856359857141783Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeEnoyl-CoA hydratase/isomerase3e-0652
NC_012726:2461102:248245024824502483247798Sulfolobus islandicus M.16.4 chromosome, complete genomeEnoyl-CoA hydratase/isomerase4e-0651.6
NC_012632:2564801:258614925861492586946798Sulfolobus islandicus M.16.27 chromosome, complete genomeEnoyl-CoA hydratase/isomerase4e-0651.6
NC_012588:2483000:250205625020562502853798Sulfolobus islandicus M.14.25 chromosome, complete genomeenoyl-CoA hydratase/isomerase4e-0651.6
NC_014228:4408500:441474944147494415522774Xenorhabdus nematophila ATCC 19061, complete genomeenoyl-CoA hydratase-isomerase, phenylacetic acid degradation (strain W)5e-0651.6
NC_010718:1959517:196499319649931965781789Natranaerobius thermophilus JW/NM-WN-LF, complete genomeshort chain enoyl-CoA hydratase5e-0651.6
NC_015948:1636491:1638219163821916401831965Haloarcula hispanica ATCC 33960 chromosome chromosome I, complete3-hydroxyacyl-CoA dehydrogenase5e-0651.2
NC_009617:2355662:236399423639942364779786Clostridium beijerinckii NCIMB 8052 chromosome, complete genome3-hydroxybutyryl-CoA dehydratase7e-0650.8
NC_011961:85083:873238732388093771Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceenoyl-coa hydratase, (shortchain enoyl-coa hydratase) (sceh) (enoyl-coa hydratase 1)7e-0650.8
NC_009952:3522370:354287035428703543646777Dinoroseobacter shibae DFL 12, complete genomeenoyl-CoA hydratase/isomerase8e-0650.8
NC_015425:1687050:169778016977801698565786Clostridium botulinum BKT015925 chromosome, complete genomeenoyl-CoA hydratase/isomerase9e-0650.4
NC_013769:2591065:261051626105162611313798Sulfolobus islandicus L.D.8.5 chromosome, complete genomehypothetical protein1e-0550.4
NC_012623:2680601:270026527002652701062798Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeenoyl-CoA hydratase/isomerase1e-0550.4
NC_012589:2605085:262475126247512625548798Sulfolobus islandicus L.S.2.15, complete genomeEnoyl-CoA hydratase/isomerase1e-0550.4
NC_017275:2519637:254098525409852541782798Sulfolobus islandicus HVE10/4 chromosome, complete genomeenoyl-CoA hydratase/isomerase1e-0550.4