Pre_GI: BLASTP Hits

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Query: NC_016830:4809210:4819084 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4819084, End: 4819410, Length: 327

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010320:1949852:1967413196741319690051593Thermoanaerobacter sp. X514 chromosome, complete genomeresponse regulator receiver protein6e-0959.3
NC_014538:985339:9853399853399869311593Thermoanaerobacter sp. X513 chromosome, complete genomeAraC family two component transcriptional regulator6e-0959.3
NC_008314:477722:486032486032486931900Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, AraC-family1e-0858.5
NC_021184:3149000:316585831658583166829972Desulfotomaculum gibsoniae DSM 7213, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain5e-0856.6
NC_010001:649000:6655526655526671201569Clostridium phytofermentans ISDg, complete genometwo component transcriptional regulator, AraC family6e-0856.2
NC_014100:449541:469746469746470255510Caulobacter segnis ATCC 21756 chromosome, complete genomeAraC family transcriptional regulator6e-0856.2
NC_013406:3851877:3863480386348038649041425Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator8e-0855.8
NC_002655:301940:309101309101309844744Escherichia coli O157:H7 EDL933, complete genomeputative AraC-type regulatory protein encoded in prophage CP-933H2e-0754.3
NC_002695:301939:309100309100309843744Escherichia coli O157:H7 str. Sakai, complete genomeputative transcription regulator2e-0754.3
NC_011353:305820:312981312981313724744Escherichia coli O157:H7 str. EC4115 chromosome, complete genometranscriptional regulator2e-0754.3
NC_013008:306953:312980312980313723744Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeAraC family transcriptional regulator2e-0754.3
NC_009800:1657550:167040116704011671114714Escherichia coli HS, complete genomeputative transcriptional regulator, AraC family2e-0754.7
NC_014655:2533929:253392925339292534795867Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, arac family2e-0754.7
NC_008261:1249595:1267397126739712689171521Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, AraC family2e-0754.7
NC_013406:4478000:449808544980854498942858Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator2e-0754.7
NC_016593:2015321:2023626202362620248311206Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeTwo component transcriptional regulator, AraC4e-0753.5
NC_012125:2687980:270174127017412702529789Salmonella enterica subsp. enterica serovar Paratyphi C strainAraC family transcriptional regulator5e-0753.1
NC_011094:1127983:113164311316431132431789Salmonella enterica subsp. enterica serovar Schwarzengrund strregulatory protein5e-0753.1
NC_011083:1173802:117746211774621178250789Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bacterial regulatory protein5e-0753.1
NC_011149:1035990:104229310422931043081789Salmonella enterica subsp. enterica serovar Agona str. SL483,bacterial regulatory protein5e-0753.1
NC_003197:1170746:117274611727461173525780Salmonella typhimurium LT2, complete genomebacterial regulatory protein5e-0753.1
NC_016810:1126693:112906811290681129847780Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator5e-0753.1
NC_016856:1128715:113109011310901131869780Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sregulatory protein5e-0753.1
NC_017046:1127325:112926211292621130104843Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator5e-0753.1
NC_016857:1126693:112900511290051129847843Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74regulatory protein5e-0753.1
NC_003228:2473956:247395624739562474882927Bacteroides fragilis NCTC 9343, complete genomeputative AraC family transcriptional regulator5e-0753.1
NC_016863:1128381:113038111303811131160780Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1regulatory protein5e-0753.1
NC_016860:1168431:117043111704311171210780Salmonella enterica subsp. enterica serovar Typhimurium strAraC family transcriptional regulator5e-0753.1
NC_016832:1880174:189439218943921894934543Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Bacterial regulatory protein, AraC6e-0753.1
NC_015186:2197236:221069822106982211576879Acidiphilium multivorum AIU301, complete genomeAraC family transcriptional regulator7e-0752.8
NC_006511:1808815:182479918247991825578780Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCbacterial regulatory protein, AraC family7e-0752.8
NC_011147:1802535:181998218199821820761780Salmonella enterica subsp. enterica serovar Paratyphi A straraC family transcriptional regulator7e-0752.8
NC_011294:1048223:105059810505981051377780Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator7e-0752.8
NC_016831:1950650:196440919644091965197789Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator7e-0752.8
NC_010102:2020762:203451220345122035300789Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-0752.8
NC_011205:1147556:115121611512161152004789Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853AraC family transcriptional regulator7e-0752.8
NC_018681:5490963:551799755179975518839843Nocardia brasiliensis ATCC 700358 chromosome, complete genometranscriptional regulatory protein9e-0752.4
NC_010001:4730000:473538047353804736159780Clostridium phytofermentans ISDg, complete genometwo component transcriptional regulator, AraC family9e-0752.4
NC_003198:1078113:1081781108178110832711491Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator (pseudogene)9e-0752.4
NC_011274:1057887:105988710598871060666780Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator1e-0652.4
NC_011740:2769961:277659727765972777337741Escherichia fergusonii ATCC 35469, complete genomeputative araC-type regulatory protein from bacteriophage origin1e-0652
NC_019973:2417000:2437006243700624381151110Mesorhizobium australicum WSM2073, complete genomeDNA-binding domain-containing protein, AraC-type2e-0650.8
NC_013406:3926531:3943386394338639450111626Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator2e-0650.8
NC_014206:1694330:172848917284891729271783Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator2e-0651.2
NC_013406:3521489:352296635229663523859894Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator2e-0651.6
NC_011979:589874:594253594253595227975Geobacter sp. FRC-32, complete genometranscriptional regulator, AraC family2e-0651.6
NC_015675:2567000:258730225873022588210909Mesorhizobium opportunistum WSM2075 chromosome, complete genomeAraC family transcriptional regulator2e-0651.6
NC_015065:162317:202038202038202922885Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequencetranscriptional regulator, AraC family3e-0650.4
NC_018524:4988810:501243150124315012778348Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory helix-turn-helix s, AraC family protein3e-0650.4
NC_014323:1:1504715047161081062Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein3e-0650.4
NC_019897:3251639:3253455325345532550831629Thermobacillus composti KWC4 chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain3e-0650.8
NC_015723:280368:291558291558292412855Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator3e-0650.8
NC_014206:1694330:1703164170316417043721209Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator4e-0650.4
NC_009328:1903291:1909484190948419106861203Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein4e-0650.1
NC_009792:1345500:135564013556401356515876Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-0649.3
NC_015379:4426827:4431388443138844324311044Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, AraC family7e-0649.3
NC_008596:4043213:407143340714334072320888Mycobacterium smegmatis str. MC2 155, complete genomeMmsAB operon regulatory protein7e-0649.3
NC_004547:843475:846356846356847111756Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator7e-0649.3
NC_009255:351695:361745361745362692948Burkholderia vietnamiensis G4 chromosome 2, complete sequenceAraC family transcriptional regulator8e-0649.3