Pre_GI: BLASTP Hits

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Query: NC_016830:4295831:4317665 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4317665, End: 4318219, Length: 555

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016584:4601645:460273746027374603285549Desulfosporosinus orientis DSM 765 chromosome, complete genomenicotinamidase-like amidase2e-1995.5
NC_002516:4285477:430726643072664307808543Pseudomonas aeruginosa PAO1, complete genomehypothetical protein1e-1892.4
NC_010551:2007926:202133420213342021864531Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceisochorismatase hydrolase2e-1892
NC_008390:2058500:207223020722302072760531Burkholderia cepacia AMMD chromosome 1, complete sequenceisochorismatase hydrolase5e-1890.5
NC_012559:2752825:276478727647872765692906Laribacter hongkongensis HLHK9, complete genomeProbable hydrolase, isochorismatase family5e-1787.4
NC_011666:1601983:161942716194271619993567Methylocella silvestris BL2, complete genomeisochorismatase hydrolase2e-1685.5
NC_012583:361241:390235390235390774540Vibrio cholerae O395 chromosome chromosome II, complete sequenceIsochorismatase hydrolase9e-1579.7
NC_009456:787322:873168873168873707540Vibrio cholerae O395 chromosome 1, complete sequenceisochorismatase family protein9e-1579.7
NC_013959:2801557:282271328227132823279567Sideroxydans lithotrophicus ES-1 chromosome, complete genomeisochorismatase hydrolase6e-1373.9
NC_018870:1953748:197394019739401974488549Thermacetogenium phaeum DSM 12270 chromosome, complete genomeisochorismatase-like protein1e-1273.2
NC_010424:448865:457006457006457557552Candidatus Desulforudis audaxviator MP104C, complete genomeisochorismatase hydrolase1e-1272.4
NC_011901:491783:513527513527514090564Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeisochorismatase hydrolase3e-1271.6
NC_008820:1143500:114898011489801149609630Prochlorococcus marinus str. MIT 9303, complete genomeIsochorismatase hydrolase family protein4e-1270.9
NC_005071:913500:936764936764937330567Prochlorococcus marinus str. MIT 9313, complete genomeIsochorismatase hydrolase family1e-1169.7
NC_018750:7540450:755800375580037558998996Streptomyces venezuelae ATCC 10712, complete genomeIsochorismatase family protein6e-1167
NC_006138:1921424:193475619347561935352597Desulfotalea psychrophila LSv54, complete genomehypothetical protein3e-1064.7
NC_015723:1486000:152937615293761530074699Cupriavidus necator N-1 chromosome 2, complete sequencehydrolase3e-0961.6
NC_007412:110698:126992126992127657666Anabaena variabilis ATCC 29413 plasmid C, complete sequenceIsochorismatase hydrolase3e-0961.2
NC_015723:280368:289562289562290260699Cupriavidus necator N-1 chromosome 2, complete sequencehydrolase5e-0960.8
NC_012108:4907430:492829049282904928847558Desulfobacterium autotrophicum HRM2, complete genomeputative amidase5e-0960.8
NC_007492:2629350:264970926497092650341633Pseudomonas fluorescens PfO-1, complete genomeIsochorismatase hydrolase7e-0960.1
NC_015733:2963548:297205929720592972745687Pseudomonas putida S16 chromosome, complete genomeisochorismatase superfamily hydrolase1e-0859.7
NC_017030:2728175:273379827337982734463666Corallococcus coralloides DSM 2259 chromosome, complete genomeisochorismatase hydrolase4e-0857.8
NC_014931:1044313:106567010656701066323654Variovorax paradoxus EPS chromosome, complete genomeisochorismatase hydrolase5e-0857.4
NC_015723:280368:301931301931302617687Cupriavidus necator N-1 chromosome 2, complete sequenceisochorismatase hydrolase7e-0857
NC_014618:2788533:279281727928172793440624Enterobacter cloacae SCF1 chromosome, complete genomeisochorismatase hydrolase1e-0756.2
NC_002939:2844240:284601428460142846646633Geobacter sulfurreducens PCA, complete genomeisochorismatase family protein2e-0755.8
NC_014100:449541:473075473075473755681Caulobacter segnis ATCC 21756 chromosome, complete genomeisochorismatase hydrolase1e-0755.8
UCMB5137:2418403:242639824263982427042645Bacillus atrophaeus UCMB-5137hypothetical protein2e-0755.5
NC_009512:2108686:213000221300022130688687Pseudomonas putida F1, complete genomeisochorismatase hydrolase2e-0755.5
NC_015566:3269469:329123232912323291918687Serratia sp. AS12 chromosome, complete genomeisochorismatase hydrolase3e-0755.1
NC_016514:1183356:118644511864451187092648Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YcaC4e-0754.3
NC_020064:3998715:400748340074834008136654Serratia marcescens FGI94, complete genomenicotinamidase-like amidase1e-0652.4
NC_011832:913994:931034931034931708675Candidatus Methanosphaerula palustris E1-9c, complete genomeisochorismatase hydrolase2e-0651.6
NC_011386:1727203:172926117292611729947687Oligotropha carboxidovorans OM5, complete genomeisochorismatase hydrolase4e-0650.8
NC_015723:1486000:152861215286121529238627Cupriavidus necator N-1 chromosome 2, complete sequenceisochorismatase hydrolase6e-0650.4