Pre_GI: BLASTP Hits

Some Help

Query: NC_016830:381049:381049 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 381049, End: 381975, Length: 927

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020260:3931567:395054339505433951403861Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-49195
NC_010506:2146444:215187221518722152747876Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, LysR family2e-1066.6
NC_015224:279037:300333300333301286954Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LysR family transcriptional regulator3e-1066.2
NC_013235:5127148:512885151288515129720870Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, LysR family1e-0964.3
NC_007509:71954:101352101352102299948Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, LysR family2e-0963.2
NC_015851:10915:301253012531045921Acidithiobacillus caldus SM-1 megaplasmid, complete sequenceLysR family transcriptional regulator3e-0962.8
NC_015566:2039431:206134420613442062264921Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator4e-0962.4
NC_019673:1420198:143785814378581438763906Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, LysR family4e-0962.4
NC_009720:670853:678728678728679645918Xanthobacter autotrophicus Py2, complete genomeLysR family transcriptional regulator6e-0962
NC_013173:3890370:390586339058633906753891Desulfomicrobium baculatum DSM 4028, complete genometranscriptional regulator, LysR family7e-0961.6
NC_014838:589581:603140603140604000861Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, LysR family1e-0860.5
NC_013592:2968500:299491129949112995762852Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family3e-0859.3
NC_000964:1474451:148535114853511486232882Bacillus subtilis subsp. subtilis str. 168, complete genometranscriptional regulator (LysR family)6e-0858.5
NC_019896:2579036:258298825829882583869882Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completePutative HTH-type transcriptional regulator YkuM6e-0858.5
NC_015726:1813961:182071118207111821682972Cupriavidus necator N-1 chromosome 1, complete sequenceLysR family transcriptional regulator6e-0858.5
NC_012559:1301988:131638213163821317329948Laribacter hongkongensis HLHK9, complete genomeTranscriptional regulator, LysR family protein8e-0858.2
NC_015424:2836920:283692028369202837774855Aeromonas veronii B565 chromosome, complete genomeLysR family transcriptional regulator7e-0858.2
NC_012660:5121219:512352751235275124450924Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator1e-0757.8
NC_012912:4428111:445503544550354455973939Dickeya zeae Ech1591, complete genometranscriptional regulator, LysR family1e-0757.8
NC_012912:4071859:410939241093924110324933Dickeya zeae Ech1591, complete genometranscriptional regulator, LysR family1e-0757.4
NC_009921:3999040:400729140072914008241951Frankia sp. EAN1pec, complete genometranscriptional regulator, LysR family1e-0757.4
NC_008322:373531:376102376102376998897Shewanella sp. MR-7, complete genometranscriptional regulator, LysR family1e-0757.4
NC_020064:3157656:317487131748713175794924Serratia marcescens FGI94, complete genometranscriptional regulator1e-0757.4
NC_014118:1528851:154451915445191545472954Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, LysR family2e-0757
NC_008537:12500:134141341414367954Arthrobacter sp. FB24 plasmid 1, complete sequencetranscriptional regulator, LysR family2e-0757
NC_007348:2519447:252462125246212525511891Ralstonia eutropha JMP134 chromosome 2, complete sequenceregulatory protein, LysR:LysR, substrate-binding2e-0757
NC_006371:1743982:174398217439821744926945Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical transcription regulator LysR family2e-0756.6
NC_015723:384000:384000384000384887888Cupriavidus necator N-1 chromosome 2, complete sequenceLysR family transcriptional regulator4e-0755.8
NC_009778:1222273:124138612413861242297912Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-0755.8
NC_020260:1293860:131801713180171318928912Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-0755.8
NC_012560:4350465:436488143648814365789909Azotobacter vinelandii DJ, complete genomeLysR family transcriptional regulator protein3e-0755.8
NC_021150:4350461:436487743648774365785909Azotobacter vinelandii CA6, complete genomeLysR family transcriptional regulator protein3e-0755.8
NC_006322:203932:203932203932204828897Bacillus licheniformis ATCC 14580, complete genomehypothetical protein5e-0755.5
NC_006270:204000:204125204125205021897Bacillus licheniformis ATCC 14580, complete genometranscriptional activator of the cysJI operon5e-0755.5
NC_010581:561579:580129580129581079951Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, LysR family5e-0755.5
NC_011761:2546081:255562825556282556551924Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeLysR family transcriptional regulator6e-0755.1
NC_011206:2447905:245745224574522458375924Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator, LysR family6e-0755.1
NC_004578:4708220:471062747106274711544918Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional activator MetR6e-0755.1
NC_020453:1881904:188636618863661887301936Agromonas oligotrophica S58 DNA, complete genometranscriptional regulator, LysR family7e-0755.1
NC_002516:891000:893967893967894851885Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator9e-0754.7
NC_010125:1651687:165302916530291653925897Gluconacetobacter diazotrophicus PAl 5, complete genometranscriptional regulator, LysR family9e-0754.7
NC_020410:2509057:252344325234432524342900Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative transcriptional regulator (LysR family)8e-0754.7
NC_004129:4596040:461326446132644614169906Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family1e-0654.3
NC_021066:3028421:302842130284213029365945Raoultella ornithinolytica B6, complete genometranscriptional regulator1e-0654.3
NC_014800:329861:346358346358347242885Pseudoalteromonas sp. SM9913 chromosome chromosome II, completeLysR family transcriptional regulator1e-0654.3
NC_014828:1335154:133861213386121339466855Ethanoligenens harbinense YUAN-3 chromosome, complete genometranscriptional regulator, LysR family1e-0654.3
NC_008463:4743296:476253547625354763419885Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable transcriptional regulator1e-0654.3
NC_016641:2773757:279559727955972796481885Paenibacillus terrae HPL-003 chromosome, complete genomeLysR family transcriptional regulator1e-0654.3
NC_014551:2057971:205797120579712058873903Bacillus amyloliquefaciens DSM 7, complete genometranscriptional regulator (LysR family)1e-0653.9
NC_017190:2002718:200271820027182003635918Bacillus amyloliquefaciens LL3 chromosome, complete genomeLysR family transcriptional regulator2e-0653.9
NC_014638:1139824:114037811403781141301924Bifidobacterium bifidum PRL2010 chromosome, complete genomeLysR family transcriptional regulator2e-0653.5
NC_020260:3277007:329164432916443292561918Cronobacter sakazakii Sp291, complete genomeLysR-family transcriptional activator2e-0653.5
NC_017030:7557295:757641075764107577321912Corallococcus coralloides DSM 2259 chromosome, complete genomeLysR family transcriptional regulator2e-0653.5
NC_019897:329945:370999370999371877879Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator2e-0653.5
NC_016641:2291363:229276922927692293662894Paenibacillus terrae HPL-003 chromosome, complete genomeLysR family transcriptional regulator2e-0653.5
NC_010524:4644587:466507146650714666003933Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family2e-0653.5
NC_008752:415599:440503440503441480978Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family2e-0653.5
NC_014323:3195178:319868231986823199647966Herbaspirillum seropedicae SmR1 chromosome, complete genomeLysR family transcription regulator protein2e-0653.1
NC_015976:2187377:220236222023622203273912Sphingobium sp. SYK-6, complete genomeLysR family transcriptional regulator3e-0653.1
NC_018681:7692560:769446976944697695374906Nocardia brasiliensis ATCC 700358 chromosome, complete genomeLysR family transcriptional regulator3e-0653.1
NC_021066:1712905:172925217292521730163912Raoultella ornithinolytica B6, complete genomeHTH-type transcriptional activator ttdR3e-0652.8
NC_013282:646569:650613650613651530918Cronobacter turicensis, complete genomehypothetical protein3e-0652.8
NC_008346:1047500:106353810635381064461924Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeLysR-type transcriptional regulator3e-0652.8
NC_009778:3287693:330055033005503301467918Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-0652.8
NC_014479:188009:201460201460202350891Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative transcriptional regulator of the rhizocticin synthesis genes3e-0652.8
NC_020272:599064:601787601787602647861Bacillus amyloliquefaciens IT-45, complete genomeRuBisCO transcriptional regulator4e-0652.8
NC_002678:6061448:607659160765916077493903Mesorhizobium loti MAFF303099, complete genometranscriptional regulator4e-0652.4
NC_013716:1298932:130178713017871302725939Citrobacter rodentium ICC168, complete genomeLysR-family transcriptional regulator5e-0652
NC_015942:668775:672839672839673759921Acidithiobacillus ferrivorans SS3 chromosome, complete genomeLysR family transcriptional regulator6e-0652
NC_015856:439795:457198457198458190993Collimonas fungivorans Ter331 chromosome, complete genometranscriptional regulator5e-0652
NC_015275:3761889:376374637637463764609864Clostridium lentocellum DSM 5427 chromosome, complete genometranscriptional regulator, LysR family5e-0652
NC_010519:1764261:176500017650001765926927Haemophilus somnus 2336 chromosome, complete genomeLysR family transcriptional regulator5e-0652
NC_015566:69190:898538985390764912Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator5e-0652
NC_015567:69190:898538985390764912Serratia sp. AS9 chromosome, complete genomeLysR family transcriptional regulator5e-0652
NC_008309:1155218:116023611602361161162927Haemophilus somnus 129PT, complete genometranscriptional regulator5e-0652
NC_014311:1545175:155104715510471551979933Ralstonia solanacearum PSI07 chromosome, complete genomeLysR family transcriptional regulator8e-0651.6
NC_016641:5306000:531288153128815313837957Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator ycf308e-0651.6
NC_017986:5467279:546907954690795469957879Pseudomonas putida ND6 chromosome, complete genomeLysR family transcriptional regulator8e-0651.6
NC_017030:6558624:656335765633576564262906Corallococcus coralloides DSM 2259 chromosome, complete genomeLysR family transcriptional regulator7e-0651.6
NC_011761:684969:690101690101691051951Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeLysR family transcriptional regulator7e-0651.6
NC_013956:3641368:364340236434023644328927Pantoea ananatis LMG 20103 chromosome, complete genomeYybE6e-0651.6
NC_016816:792460:820167820167821093927Pantoea ananatis LMG 5342, complete genomeLysR family transcriptional regulator6e-0651.6
NC_011206:863987:869119869119870027909Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator, LysR family6e-0651.6
NC_009512:3068495:308697430869743087852879Pseudomonas putida F1, complete genometranscriptional regulator, LysR family8e-0651.2
NC_009439:918534:922954922954923841888Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator9e-0651.2
NC_015061:2770856:279177727917772792700924Rahnella sp. Y9602 chromosome, complete genomeLysR family transcriptional regulator9e-0651.2
NC_012121:113912:115096115096116004909Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative transcriptional regulator of LysR type1e-0551.2
NC_010995:4297361:431468343146834315576894Cellvibrio japonicus Ueda107, complete genometranscriptional regulator, LysR family1e-0551.2