Pre_GI: BLASTP Hits

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Query: NC_016830:3697173:3729315 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3729315, End: 3730799, Length: 1485

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:1811874:1815627181562718170841458Pseudomonas aeruginosa LESB58, complete genomehypothetical protein9e-88324
NC_008463:1756434:176250817625081763482975Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-76287
NC_007005:2686551:2696813269681326983151503Pseudomonas syringae pv. syringae B728a, complete genomeYD repeat2e-75283
NC_007005:2686551:2695281269528126968071527Pseudomonas syringae pv. syringae B728a, complete genomeYD repeat3e-75283
NC_002516:2750128:275691827569182757898981Pseudomonas aeruginosa PAO1, complete genomehypothetical protein4e-74279
NC_008463:2848568:2874987287498728760031017Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-71269
NC_011770:3049830:307465030746503075549900Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-70267
NC_008463:2848568:287326528732652874218954Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-70266
NC_011770:3049830:307637230763723077304933Pseudomonas aeruginosa LESB58, complete genomehypothetical protein7e-63241
NC_018080:2732962:274314027431402743649510Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein5e-55215
NC_003296:1980687:1988766198876619913572592Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE RHS-RELATED TRANSMEMBRANE PROTEIN2e-38160
NC_014311:978761:1004505100450510071082604Ralstonia solanacearum PSI07 chromosome, complete genomeRHS_repeat1e-36154
NC_003295:2669480:2678417267841726810892673Ralstonia solanacearum GMI1000, complete genomePROBABLE RHS-RELATED PROTEIN3e-36153
NC_005085:1269787:1303614130361413070123399Chromobacterium violaceum ATCC 12472, complete genomeprobable rhs-related protein2e-35150
NC_014307:939601:9468239468239495102688Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein6e-35149
NC_014366:354000:3613563613563662424887Gamma proteobacterium HdN1, complete genomeRhs family protein2e-33143
NC_014972:1621850:1639704163970416464836780Desulfobulbus propionicus DSM 2032 chromosome, complete genomeYD repeat-containing protein9e-33141
NC_003296:87313:9248392483949392457Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE RHS-RELATED PROTEIN3e-31137
NC_003296:556836:5746865746865761851500Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE RHS-RELATED PROTEIN1e-30134
NC_014311:3348102:3352845335284533550282184Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein8e-29128
NC_014311:263963:2865312865312887052175Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein2e-28127
NC_014366:2393702:2409091240909124139204830Gamma proteobacterium HdN1, complete genomehypothetical protein2e-28127
NC_010511:2703684:2714216271421627177493534Methylobacterium sp. 4-46 chromosome, complete genomeYD repeat-containing protein5e-28125
NC_003296:556836:5724935724935742561764Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE RHS-RELATED PROTEIN4e-27122
NC_014307:233045:2518782518782535751698Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein1e-26121
NC_014311:263963:2841772841772863692193Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein6e-25115
NC_014366:2393702:2401915240191524068614947Gamma proteobacterium HdN1, complete genomeprobable Rhs family protein1e-24114
NC_003919:3812778:3823370382337038279024533Xanthomonas axonopodis pv. citri str. 306, complete genomeRhsD protein8e-23108
NC_010943:2815865:2826272282627228306514380Stenotrophomonas maltophilia K279a, complete genomeputative Rhs-family transmembrane protein8e-22105
NC_013422:991500:1007521100752110119244404Halothiobacillus neapolitanus c2, complete genomeYD repeat protein2e-1894.4
NC_003296:556836:5698085698085718532046Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE RHS-RELATED PROTEIN7e-1892.4
NC_016010:1822212:1834166183416618380413876Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeRhs family protein8e-1892
NC_015947:1142206:1149211114921111537614551Burkholderia sp. JV3 chromosome, complete genomeRHS repeat-associated core domain-containing protein2e-1790.5
NC_015947:4248536:4261991426199142642492259Burkholderia sp. JV3 chromosome, complete genomeYD repeat-containing protein4e-1789.7
NC_015677:1282865:1307871130787113114913621Ramlibacter tataouinensis TTB310 chromosome, complete genomeRhs protein1e-1688.2
NC_014307:1619000:1630533163053316317231191Ralstonia solanacearum CFBP2957 chromosome, complete genomecore protein (fragment)3e-1687
NC_010943:4527366:4534194453419445387354542Stenotrophomonas maltophilia K279a, complete genomeputative Rhs-family exported protein5e-1686.3
NC_003902:155627:1656691656691701744506Xanthomonas campestris pv. campestris str. ATCC 33913, completeRhsD protein1e-1584.7
NC_007086:155223:1652631652631695074245Xanthomonas campestris pv. campestris str. 8004, complete genomeRhsD protein2e-1584.3
NC_007508:3835000:3845309384530938487433435Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRhs family protein1e-1378.6
NC_007508:4765751:4771695477169547760084314Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRhs family protein5e-1376.3
NC_015947:3539472:3549592354959235539024311Burkholderia sp. JV3 chromosome, complete genomeRHS repeat-associated core domain-containing protein2e-1274.3
NC_020541:268406:2762482762482803034056Rhodanobacter sp. 2APBS1, complete genomeRHS repeat-associated core domain protein3e-0963.5
NC_020541:1510782:1517677151767715198932217Rhodanobacter sp. 2APBS1, complete genomeRhs family protein5e-0962.8
NC_003919:2956404:2962809296280929675874779Xanthomonas axonopodis pv. citri str. 306, complete genomeRhsD protein5e-0962.8
NC_014307:3240430:3244546324454632471852640Ralstonia solanacearum CFBP2957 chromosome, complete genomerhs-like protein4e-0757
NC_014307:1619000:1629146162914616306751530Ralstonia solanacearum CFBP2957 chromosome, complete genomerhs-like protein (fragment)7e-0755.8
NC_006834:1602994:1608522160852216130124491Xanthomonas oryzae pv. oryzae KACC10331, complete genomeRhsD protein precursor9e-0755.5
NC_007705:1583373:1589426158942615939164491Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomeputative Rhs-related protein2e-0654.3
NC_011979:4062000:4081438408143840853043867Geobacter sp. FRC-32, complete genomeYD repeat-containing protein2e-0654.3
NC_003902:1858349:1908315190831519105072193Xanthomonas campestris pv. campestris str. ATCC 33913, completeRhsD protein precursor5e-0653.1
NC_007086:3118116:3125910312591031303074398Xanthomonas campestris pv. campestris str. 8004, complete genomeRhsD protein9e-0652.4