Pre_GI: BLASTP Hits

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Query: NC_016830:3697173:3714801 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3714801, End: 3715781, Length: 981

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008027:4889662:489228348922834893212930Pseudomonas entomophila L48, complete genomeFecR-like transmembrane sensor2e-48193
NC_007974:934000:952517952517953503987Ralstonia metallidurans CH34 chromosome 2, complete sequenceputative FecR3e-46186
NC_015556:2265940:230352123035212304444924Pseudomonas fulva 12-X chromosome, complete genomeanti-FecI sigma factor, FecR2e-43176
NC_014640:2693060:269635326963532697321969Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein5e-43174
NC_018691:1293449:131480613148061315771966Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor FecR2e-41169
NC_010322:768849:791778791778792734957Pseudomonas putida GB-1 chromosome, complete genomeanti-FecI sigma factor FecR7e-41167
NC_016612:3843358:387155938715593872506948Klebsiella oxytoca KCTC 1686 chromosome, complete genomefec operon regulator FecR8e-41167
NC_015572:427732:455162455162456127966Methylomonas methanica MC09 chromosome, complete genomeanti-FecI sigma factor FecR1e-38160
NC_014228:3591758:3599750359975036007931044Xenorhabdus nematophila ATCC 19061, complete genomeProtein fecR2e-38159
NC_004547:1174650:120816712081671209129963Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeiron(III) dicitrate sensor protein2e-38159
NC_012962:4591295:459839645983964599361966Photorhabdus asymbiotica, complete genomeprotein fecr4e-37155
NC_010473:4596500:461659546165954617548954Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport9e-36150
AC_000091:4501430:452144445214444522397954Escherichia coli W3110 DNA, complete genometransmembrane signal transducer for ferric citrate transport9e-36150
NC_012759:4433500:445352244535224454475954Escherichia coli BW2952 chromosome, complete genomefec operon regulator FecR9e-36150
NC_016822:4889656:489301448930144893967954Shigella sonnei 53G, complete genomefec operon regulator FecR9e-36150
NC_018691:318662:318662318662319606945Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor, FecR5e-35148
NC_005126:5188976:519356151935615194526966Photorhabdus luminescens subsp. laumondii TTO1, complete genomeProtein fecR2e-34146
NC_010322:768849:785508785508786506999Pseudomonas putida GB-1 chromosome, complete genomeanti-FecI sigma factor FecR2e-32139
NC_008027:2648560:265110926511092652029921Pseudomonas entomophila L48, complete genomeFecR-like transmembrane sensor2e-31136
NC_014640:5047201:506272550627255063720996Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein9e-29127
NC_021150:201237:216665216665217627963Azotobacter vinelandii CA6, complete genomeanti-sigma factor, FecR family3e-26119
NC_012560:201237:216665216665217627963Azotobacter vinelandii DJ, complete genomeanti-sigma factor, FecR family3e-26119
NC_016112:1735044:175536217553621756315954Methylomicrobium alcaliphilum chromosome, complete genomeAnti-FecI sigma factor, FecR5e-22105
NC_014640:5047201:5066881506688150678941014Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein6e-22105
NC_005966:1780468:178461817846181785559942Acinetobacter sp. ADP1, complete genomemembrane bound regulator in multi-component regulatory system with cytoplasmic FecI (sigma factor) and FecA (outer membrane receptor)5e-2098.6
NC_011958:1121387:114404611440461145020975Rhodobacter sphaeroides KD131 chromosome 2, complete genomeFecR protein2e-1996.7
NC_009040:43791:623866238663360975Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completeputative FecR4e-1995.9
NC_007953:1088933:108798010879801088936957Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative FecR4e-1995.9
NC_015410:1324313:132982813298281330793966Pseudomonas mendocina NK-01 chromosome, complete genomeputative transmembrane sensor2e-1893.6
NC_014540:2908912:291099429109942911962969Burkholderia sp. CCGE1003 chromosome 2, complete sequenceanti-FecI sigma factor, FecR7e-1891.7
NC_015563:4093650:4097302409730240983301029Delftia sp. Cs1-4 chromosome, complete genomeanti-FecI sigma factor FecR1e-1790.9
NC_014664:1360524:137378513737851374765981Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeanti-FecI sigma factor, FecR5e-1582
NC_018691:359695:359695359695360609915Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor, FecR5e-1479
NC_011144:2710876:272531427253142726300987Phenylobacterium zucineum HLK1, complete genometranscriptional regulator1e-1377.8
NC_015593:2841856:288455028845502885536987Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeanti-FecI sigma factor FecR3e-1376.3
NC_010338:2136193:2139478213947821405121035Caulobacter sp. K31, complete genomeanti-FecI sigma factor, FecR6e-1375.1
NC_015594:1210736:121465212146521215626975Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeanti-FecI sigma factor FecR6e-1271.6
NC_018691:3525430:353716735371673538147981Alcanivorax dieselolei B5 chromosome, complete genomeSigma factor regulatory protein, FecR/PupR family1e-1171.2
NC_013421:1954915:197058119705811971534954Pectobacterium wasabiae WPP163, complete genomeanti-FecI sigma factor, FecR1e-1170.9
NC_009937:5033152:503543550354355036382948Azorhizobium caulinodans ORS 571, complete genomeputative iron siderophore sensor protein6e-1168.6
NC_014100:2782000:280326228032622804257996Caulobacter segnis ATCC 21756 chromosome, complete genomeanti-FecI sigma factor FecR1e-1067.4
NC_008687:133728:153212153212154198987Paracoccus denitrificans PD1222 chromosome 2, complete sequenceputative FecR2e-1067
NC_010943:1379707:138250813825081383476969Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane protein3e-1066.6
NC_020409:584000:5932265932265942901065Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Anti-FecI sigma factor, FecR4e-1065.9
NC_017192:1933106:193807519380751939040966Arcobacter sp. L, complete genomesigma factor regulator2e-0963.5
NC_014375:1146328:117307511730751174031957Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeanti-FecI sigma factor, FecR3e-0963.2
NC_015497:4683741:470812247081224709078957Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeanti-FecI sigma factor, FecR4e-0962.4
NC_015160:3180193:3195787319578731969471161Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR5e-0962
NC_007492:3655545:367411036741103675048939Pseudomonas fluorescens PfO-1, complete genomePutative FecR9e-0961.2
NC_015976:3118804:311880431188043119787984Sphingobium sp. SYK-6, complete genomeputative anti-sigma factor1e-0757.4
NC_008686:1592073:161110316111031612077975Paracoccus denitrificans PD1222 chromosome 1, complete sequenceputative FecR5e-0755.8
NC_007947:1429165:1440674144067414417201047Methylobacillus flagellatus KT, complete genomeputative FecR3e-0653.1
NC_014305:97055:99531995311005651035Erwinia billingiae Eb661 plasmid pEB170, complete sequenceAnti-FecI sigma factor3e-0653.1
NC_015976:2150676:2158706215870621597341029Sphingobium sp. SYK-6, complete genomeputative anti-sigma factor3e-0653.1