Pre_GI: BLASTP Hits

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Query: NC_016830:3230939:3234480 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3234480, End: 3235751, Length: 1272

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009792:1479779:1482234148223414835021269Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-175614
NC_020304:3751710:3756878375687837581161239Desulfocapsa sulfexigens DSM 10523, complete genomeHipA-like protein3e-65249
NC_012483:1841000:1842843184284318440811239Acidobacterium capsulatum ATCC 51196, complete genomeHipA family protein5e-61235
NC_009663:1656804:1663154166315416643711218Sulfurovum sp. NBC37-1, complete genomehypothetical protein1e-60234
NC_015510:644500:6500226500226512421221Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeHipA domain-containing protein4e-60232
NC_012108:2874831:2874831287483128760901260Desulfobacterium autotrophicum HRM2, complete genomeputative capsule biosynthesis protein HipA4e-56219
NC_010995:4460413:4478850447885044801331284Cellvibrio japonicus Ueda107, complete genomehypothetical protein2e-47190
NC_007722:2954876:2978971297897129802661296Erythrobacter litoralis HTCC2594, complete genomehypothetical protein4e-42172
NC_015160:2145915:2148043214804321495331491Odoribacter splanchnicus DSM 20712 chromosome, complete genomeHipA domain-containing protein7e-42171
NC_015160:2239933:2244469224446922459621494Odoribacter splanchnicus DSM 20712 chromosome, complete genomeHipA domain-containing protein2e-41169
NC_009053:1942973:1952377195237719536331257Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein6e-40165
NC_012778:748143:7637147637147650211308Eubacterium eligens ATCC 27750, complete genomehypothetical protein2e-39163
NC_013410:2179342:2182000218200021832951296Fibrobacter succinogenes subsp. succinogenes S85 chromosome,HipA domain-containing protein2e-35150
NC_010803:1573849:1579699157969915809791281Chlorobium limicola DSM 245, complete genomeHipA domain protein2e-35150
NC_006512:2211654:2215113221511322164381326Idiomarina loihiensis L2TR, complete genomeUncharacterized conserved protein HipA8e-34145
NC_008800:1300500:1314461131446113157681308Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-32140
NC_004547:138500:1458011458011470511251Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-22108
NC_014973:4174668:4196676419667641979261251Geobacter sp. M18 chromosome, complete genomeHipA domain-containing protein3e-22106
NC_011060:244949:2596282596282608721245Pelodictyon phaeoclathratiforme BU-1, complete genomeHipA domain protein6e-1995.9
NC_015497:4683741:4702719470271947039571239Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeHipA domain protein2e-1894
NC_009615:2503465:2543269254326925445341266Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein5e-1892.4
NC_016803:2431672:2455849245584924570991251Desulfovibrio desulfuricans ND132 chromosome, complete genomeHipA domain-containing protein9e-1891.7
NC_016816:3974895:3998338399833839995881251Pantoea ananatis LMG 5342, complete genomeHipA domain-containing protein1e-1791.7
NC_012108:4971086:4998654499865449999521299Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein3e-1790.1
NC_009943:1043210:1047736104773610489651230Candidatus Desulfococcus oleovorans Hxd3, complete genomeHipA domain protein2e-1584.3
NC_016609:7608723:7622598762259876238781281Niastella koreensis GR20-10 chromosome, complete genomeHipA domain-containing protein2e-1584
NC_002927:506183:5545445545445558391296Bordetella bronchiseptica RB50, complete genomehypothetical protein1e-1481.6
NC_010815:40357:4620246202474461245Geobacter lovleyi SZ plasmid pGLOV01, complete sequenceHipA domain protein1e-1481.3
NC_015711:2050360:2056597205659720577931197Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein5e-1479.3
NC_013446:2961647:2990142299014229914011260Comamonas testosteroni CNB-2, complete genomehypothetical protein5e-1479.3
NC_019973:5716453:5749101574910157503481248Mesorhizobium australicum WSM2073, complete genomeHipA-like protein1e-1378.2
NC_015675:6342164:6374812637481263760591248Mesorhizobium opportunistum WSM2075 chromosome, complete genomeHipA domain-containing protein1e-1378.2
NC_014923:5787493:5820141582014158213881248Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeHipA domain protein1e-1378.2
NC_015850:761500:7644577644577657341278Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein4e-1376.3
NC_004578:568236:5699455699455711711227Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein6e-1375.5
NC_014923:5765660:5767382576738257686681287Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeHipA domain protein2e-1273.9
NC_015675:6276357:6322053632205363233391287Mesorhizobium opportunistum WSM2075 chromosome, complete genomeHipA domain-containing protein2e-1273.9
NC_019973:5694620:5696342569634256976281287Mesorhizobium australicum WSM2073, complete genomecapsule biosynthesis enzymes related protein2e-1273.9
NC_010725:3961981:3965622396562239669291308Methylobacterium populi BJ001, complete genomeHipA domain protein3e-1273.6
NC_009665:2352528:2362631236263123638931263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein4e-1272.8
NC_010803:242705:2633172633172645641248Chlorobium limicola DSM 245, complete genomeHipA domain protein2e-1170.5
NC_010814:294394:2995142995143008061293Geobacter lovleyi SZ, complete genomeHipA domain protein1e-1067.8
NC_015733:2963548:2977407297740729786001194Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-1067.8
NC_016589:2824164:2844132284413228454781347Burkholderia sp. YI23 chromosome 1, complete sequenceHipA domain-containing protein4e-1066.6
NC_017223:51180:5924959249604751227Bordetella pertussis CS chromosome, complete genomehypothetical protein5e-1065.9
NC_002929:52500:5924959249604751227Bordetella pertussis Tohama I, complete genomehypothetical protein5e-1065.9
NC_008609:251608:2608462608462621381293Pelobacter propionicus DSM 2379, complete genomeHipA domain protein1e-0964.7
NC_002928:507749:5543395543395555291191Bordetella parapertussis 12822, complete genomehypothetical protein1e-0964.7
NC_016901:4039335:4048914404891440501761263Shewanella baltica OS678 chromosome, complete genomeHipA N-terminal domain-containing protein8e-0962
NC_009997:4091371:4100950410095041022121263Shewanella baltica OS195, complete genomeHipA N-terminal domain protein8e-0962
NC_009615:322107:342432342432342878447Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein3e-0860.5
NC_008278:256427:2701312701312714291299Frankia alni ACN14a, complete genomeputative HipA protein.8e-0858.5
NC_009997:3988980:3999559399955940008211263Shewanella baltica OS195, complete genomeHipA N-terminal domain protein1e-0758.2
NC_016901:3936944:3947523394752339487851263Shewanella baltica OS678 chromosome, complete genomeHipA N-terminal domain-containing protein1e-0758.2
NC_008786:738791:7504987504987518711374Verminephrobacter eiseniae EF01-2, complete genomeHipA domain protein1e-0758.2
NC_009665:3984080:3994654399465439959161263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein1e-0758.2
NC_009665:2219082:2232566223256622338281263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein1e-0758.2
NC_002678:5714000:5715623571562357168851263Mesorhizobium loti MAFF303099, complete genomehypothetical protein2e-0757.8
NC_009665:3869904:3884666388466638859281263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein2e-0757.8
NC_015761:4355335:435570943557094356320612Salmonella bongori NCTC 12419, complete genomehypothetical protein3e-0653.5