Pre_GI: BLASTP Hits

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Query: NC_016830:2247789:2252340 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 2252340, End: 2252413, Length: 74

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:2247789:22521742252174225224774Pseudomonas fluorescens F113 chromosome, complete genometRNA-Asp3e-0650.4
NC_012660:2045398:20504262050426205049974Pseudomonas fluorescens SBW25 chromosome, complete genometRNA-Asp3e-0650.4
NC_012660:2045398:20500782050078205015174Pseudomonas fluorescens SBW25 chromosome, complete genometRNA-Asp3e-0650.4
NC_018080:1730534:17355461735546173562277Pseudomonas aeruginosa DK2 chromosome, complete genometRNA-Asp3e-0650.4
NC_015379:4691868:47110124711012471108877Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,tRNA-Asp3e-0650.4
NC_015379:4691868:47108454710845471092177Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,tRNA-Asp3e-0650.4
NC_007645:2204066:22157182215718221579477Hahella chejuensis KCTC 2396, complete genometRNA-Asp9e-0648.9