Pre_GI: BLASTP Hits

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Query: NC_016830:2168523:2168523 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 2168523, End: 2169803, Length: 1281

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:3163480:3193848319384831951251278Pseudomonas aeruginosa LESB58, complete genomePvdN3e-141501
NC_007484:1823751:1850459185045918515921134Nitrosococcus oceani ATCC 19707, complete genomeAminotransferase, class V5e-2099.4
NC_004463:1369165:1391758139175813932031446Bradyrhizobium japonicum USDA 110, complete genomeputative isopenicillin N epimerase1e-1997.8
NC_014541:3642241:3646276364627636476611386Ferrimonas balearica DSM 9799 chromosome, complete genomeaminotransferase class V6e-1995.5
NC_008789:7347:7347734784771131Halorhodospira halophila SL1, complete genomeaminotransferase, class V8e-1995.1
NC_007645:2842957:2842957284295728441171161Hahella chejuensis KCTC 2396, complete genomeSelenocysteine lyase5e-1789.4
NC_014834:959986:9709769709769721481173Rhodopseudomonas palustris DX-1 chromosome, complete genomeclass V aminotransferase1e-1688.2
NC_016620:3259749:3259749325974932609601212Bacteriovorax marinus SJ, complete genomeputative selenocysteine lyase6e-1582.4
NC_016001:2421580:2436712243671224378661155Flavobacterium branchiophilum, complete genomeaminotransferase, class V2e-1480.9
NC_019940:2236630:2243906224390622453751470Thioflavicoccus mobilis 8321 chromosome, complete genomeselenocysteine lyase4e-1479.7
NC_014815:1686409:1686409168640916875901182Micromonospora sp. L5 chromosome, complete genomeaminotransferase class v8e-1478.6
NC_018664:3009166:3036767303676730379091143Clostridium acidurici 9a chromosome, complete genomecysteine desulfurase CsdB1e-1378.2
NC_014210:2372813:2396558239655823977241167Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,aminotransferase class V4e-1376.6
NC_015387:1898496:1904147190414719053671221Marinithermus hydrothermalis DSM 14884 chromosome, complete genomecysteine desulfurase, SufS subfamily5e-1375.9
NC_013964:161105:1634951634951646281134Haloferax volcanii DS2 plasmid pHV3, complete sequenceaminotransferase class V8e-1375.5
NC_013158:768000:7700977700977712001104Halorhabdus utahensis DSM 12940, complete genomeaminotransferase class V8e-1375.5
NC_014623:659422:6628836628836641241242Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeselenocysteine lyase4e-1273.2
NC_009952:1680682:1688923168892316901431221Dinoroseobacter shibae DFL 12, complete genomecysteine desulfurase3e-1273.2
NC_011969:4655602:4666781466678146680011221Bacillus cereus Q1 chromosome, complete genomeaminotransferase, class v, cysteine desulfhydrase1e-1171.2
NC_009483:3644677:3666680366668036678161137Geobacter uraniireducens Rf4 chromosome, complete genomecysteine desulfurase1e-1171.2
NC_010717:3933485:3935508393550839367521245Xanthomonas oryzae pv. oryzae PXO99A, complete genomecysteine desulfurase1e-1171.2
NC_011772:4875893:4885637488563748868571221Bacillus cereus G9842, complete genomecysteine desulfurase SufS1e-1171.2
NC_007705:1388607:1409605140960514108491245Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomecysteine desulfurase1e-1171.2
NC_006834:1414113:1435259143525914365031245Xanthomonas oryzae pv. oryzae KACC10331, complete genomecysteine desulfurase1e-1171.2
NC_010184:4763932:4773890477389047751101221Bacillus weihenstephanensis KBAB4, complete genomecysteine desulfurase, SufS subfamily3e-1169.7
NC_017075:4153128:4154996415499641561441149Rubrivivax gelatinosus IL144, complete genomeputative epimerase1e-1068.6
NC_010376:606000:6209766209766221031128Finegoldia magna ATCC 29328, complete genomeiron-sulfur cofactor synthesis protein1e-1067.8
NC_015474:1432065:1455130145513014562721143Pyrococcus sp. NA2 chromosome, complete genomeputative protein aminotransferase, class V3e-1066.6
NC_014643:1577021:1580441158044115817391299Rothia dentocariosa ATCC 17931 chromosome, complete genomecysteine desulfurase SufS4e-1066.2
NC_010511:6756000:6767136676713667683861251Methylobacterium sp. 4-46 chromosome, complete genomeclass V aminotransferase4e-1066.2
NC_013715:1750403:1764945176494517662431299Rothia mucilaginosa DY-18, complete genomeselenocysteine lyase5e-1066.2
NC_010995:2547164:2566514256651425684301917Cellvibrio japonicus Ueda107, complete genomecysteine desulfurase, SufS subfamily8e-1065.5
NC_016582:7737930:7755626775562677568821257Streptomyces bingchenggensis BCW-1 chromosome, complete genomeclass V aminotransferase7e-1065.5
NC_013440:1698047:1705649170564917069411293Haliangium ochraceum DSM 14365, complete genomeaminotransferase class V7e-1065.5
NC_015578:423000:4570854570854589621878Treponema primitia ZAS-2 chromosome, complete genomeputative cysteine desulfurase9e-1065.1
NC_011884:3302500:3304797330479733060441248Cyanothece sp. PCC 7425, complete genomeaminotransferase class V1e-0965.1
NC_010688:3515885:3528716352871635299631248Xanthomonas campestris pv. campestris, complete genomeisopenicillin-N epimerase1e-0964.7
NC_007907:4859735:4866749486674948679121164Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0963.9
NC_017271:1477323:1478805147880514800611257Xanthomonas campestris pv. raphani 756C chromosome, completeisopenicillin N epimerase4e-0963.2
NC_017190:3166000:3182479318247931836991221Bacillus amyloliquefaciens LL3 chromosome, complete genomecysteine desulfurase4e-0963.2
NC_017341:903473:9230879230879243371251Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,cysteine desulfurase, SufS subfamily5e-0962.8
NC_003902:1416000:1418561141856114198081248Xanthomonas campestris pv. campestris str. ATCC 33913, completeisopenicillin N epimerase5e-0962.8
NC_018876:996855:1026432102643210276131182Methanolobus psychrophilus R15 chromosome, complete genomeaminotransferase, class V6e-0962.4
NC_007517:2241104:2244290224429022454771188Geobacter metallireducens GS-15, complete genomeCysteine desulphurases, SufS6e-0962.4
NC_004459:1794540:1805348180534818065591212Vibrio vulnificus CMCP6 chromosome I, complete sequenceSelenocysteine lyase8e-0962
NC_015690:1109335:1112982111298211142081227Paenibacillus mucilaginosus KNP414 chromosome, complete genomeCsd1e-0861.6
NC_013410:1285857:1307776130777613089991224Fibrobacter succinogenes subsp. succinogenes S85 chromosome,SufS subfamily cysteine desulfurase1e-0861.6
NC_011283:1811000:1815929181592918174191491Klebsiella pneumoniae 342 chromosome, complete genomecysteine desulfurase, SufS family1e-0861.6
NC_015519:426948:4651084651084662501143Tepidanaerobacter sp. Re1 chromosome, complete genomecysteine desulfurase family protein1e-0861.2
NC_009659:2849000:2866079286607928680401962Janthinobacterium sp. Marseille chromosome, complete genomeselenocysteine lyase1e-0861.2
NC_016935:1636278:1641033164103316422591227Paenibacillus mucilaginosus 3016 chromosome, complete genomeprotein Csd1e-0861.2
NC_017271:4410500:4415936441593644172311296Xanthomonas campestris pv. raphani 756C chromosome, completeisopenicillin N epimerase3e-0860.1
NC_016627:1807866:1819036181903618201811146Clostridium clariflavum DSM 19732 chromosome, complete genomecysteine desulfurase3e-0860.1
NC_014925:578759:5800955800955813361242Staphylococcus pseudintermedius HKU10-03 chromosome, completeCysteine desulfurase, SufS subfamily4e-0859.7
NC_002939:2008304:2044085204408520452271143Geobacter sulfurreducens PCA, complete genomeaminotransferase, class V6e-0859.3
NC_020125:194691:2159822159822172021221Riemerella anatipestifer RA-CH-2, complete genomeSelenocysteine lyase6e-0858.9
NC_014738:1507641:1511671151167115128911221Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,cysteine desulfurase6e-0858.9
NC_011830:3786173:3803764380376438049661203Desulfitobacterium hafniense DCB-2, complete genomecysteine desulfurase NifS6e-0858.9
NC_008702:369965:3915033915033933351833Azoarcus sp. BH72, complete genomeprobable cysteine desulphurase9e-0858.5
NC_015391:448833:4558924558924571301239Carnobacterium sp. 17-4 chromosome, complete genomecysteine desulfurase1e-0758.2
NC_016077:388941:4020674020674032871221Acidaminococcus intestini RyC-MR95 chromosome, complete genomecysteine desulfurase / selenocysteine lyase1e-0757.8
NC_011884:3393500:3394330339433033955921263Cyanothece sp. PCC 7425, complete genomecysteine desulfurase, SufS subfamily2e-0757.4
NC_014328:3120145:3140368314036831415041137Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecysteine desulfurase3e-0757
NC_014624:224213:2349372349372361031167Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-0757
NC_021182:401129:4169724169724181081137Clostridium pasteurianum BC1, complete genomecysteine desulfurase family protein3e-0756.6
NC_010830:1291415:1294440129444012956781239Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein4e-0756.2
NC_014727:1736500:1750004175000417512181215Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,cysteine sulfinate desulfinase/cysteine desulfurase related enzyme4e-0756.2
NC_011832:1535740:1556156155615615588462691Candidatus Methanosphaerula palustris E1-9c, complete genomeaminotransferase class V8e-0755.5
NC_007086:459934:4773014773014785961296Xanthomonas campestris pv. campestris str. 8004, complete genomeisopenicillin N epimerase8e-0755.5
NC_003902:461808:4751984751984764931296Xanthomonas campestris pv. campestris str. ATCC 33913, completeisopenicillin N epimerase8e-0755.5
NC_010688:449649:4630374630374643321296Xanthomonas campestris pv. campestris, complete genomeexported cysteine desulfurase8e-0755.5
NC_018515:989616:9957829957829969661185Desulfosporosinus meridiei DSM 13257 chromosome, complete genomecysteine desulfurase NifS1e-0655.1
NC_013730:3137391:3154994315499431561931200Spirosoma linguale DSM 74, complete genomeaminotransferase class V1e-0655.1
NC_019977:2141677:2162201216220121633821182Methanomethylovorans hollandica DSM 15978, complete genomeselenocysteine lyase9e-0755.1
NC_016605:233087:2409432409432421781236Pediococcus claussenii ATCC BAA-344 chromosome, complete genomecysteine desulfurase SufS2e-0653.9
NC_007516:731193:7552947552947564601167Synechococcus sp. CC9605, complete genomeputative L-cysteine/cystine lyase4e-0652.8
NC_015690:8645500:8652781865278186539411161Paenibacillus mucilaginosus KNP414 chromosome, complete genomeSelenocysteine lyase5e-0652.8
NC_006155:652500:6586646586646599321269Yersinia pseudotuberculosis IP 32953, complete genomepossible conserved cysteine desulfurase5e-0652.8
NC_016935:8716704:8728010872801087291701161Paenibacillus mucilaginosus 3016 chromosome, complete genomeSelenocysteine lyase6e-0652.4
NC_002516:891000:8911428911428923891248Pseudomonas aeruginosa PAO1, complete genomehypothetical protein7e-0652
NC_012559:2752825:2770136277013627713531218Laribacter hongkongensis HLHK9, complete genomeNifS8e-0652
NC_005071:265520:2676372676372688391203Prochlorococcus marinus str. MIT 9313, complete genomeputative L-cysteine/cystine lyase8e-0652
NC_008463:4743296:4764997476499747662441248Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein9e-0652