Pre_GI: BLASTP Hits

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Query: NC_016830:1182765:1210746 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1210746, End: 1211516, Length: 771

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:1151143:118202511820251182795771Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative tRNA/rRNA methyltransferase2e-147521
NC_011740:621408:639576639576640316741Escherichia fergusonii ATCC 35469, complete genomeputative methyltransferase1e-73276
NC_007484:1823751:184170118417011842444744Nitrosococcus oceani ATCC 19707, complete genomeRNA methyltransferase TrmH, group 12e-68258
NC_010084:1299387:131418313141831315052870Burkholderia multivorans ATCC 17616 chromosome 1, completeRNA methyltransferase1e-51203
NC_010804:2206000:220972122097212210551831Burkholderia multivorans ATCC 17616 chromosome 1, completetRNA/rRNA methyltransferase1e-51203
NC_007651:2166000:2181126218112621821421017Burkholderia thailandensis E264 chromosome I, complete sequenceRNA methyltransferase, TrmH family, group 17e-49194
NC_002939:1601706:161658216165821617349768Geobacter sulfurreducens PCA, complete genomeRNA methyltransferase, TrmH family, group 14e-40164
NC_007517:1515493:153202815320281532774747Geobacter metallireducens GS-15, complete genomeRNA methyltransferase TrmH, group 14e-39161
NC_010002:2518599:254106325410632541890828Delftia acidovorans SPH-1, complete genometRNA/rRNA methyltransferase (SpoU)7e-36150
NC_011146:3089297:310987531098753110612738Geobacter bemidjiensis Bem, complete genomeRNA methyltransferase, TrmH family, group 18e-36150
NC_015563:4911188:491204849120484912857810Delftia sp. Cs1-4 chromosome, complete genometRNA/rRNA methyltransferase SpoU1e-35150
NC_005125:2269343:229133722913372292077741Gloeobacter violaceus PCC 7421, complete genomeprobable methyltransferase2e-31135
NC_020304:2107979:214786621478662148645780Desulfocapsa sulfexigens DSM 10523, complete genomeRNA methyltransferase, TrmH family, group 16e-30131
NC_009720:5046861:505163350516335052529897Xanthobacter autotrophicus Py2, complete genomeRNA methyltransferase7e-29127
NC_014817:142976:148352148352149146795Asticcacaulis excentricus CB 48 chromosome 2, complete sequencetRNA/rRNA methyltransferase (spou)3e-28125
NC_010338:3743000:379822237982223799022801Caulobacter sp. K31, complete genometRNA/rRNA methyltransferase (SpoU)3e-28125
NC_008343:1250869:127279312727931273566774Granulibacter bethesdensis CGDNIH1, complete genomeRRNA methylase, SpoU family6e-27121
NC_007626:2283793:230295623029562303723768Magnetospirillum magneticum AMB-1, complete genomerRNA methylase9e-25114
NC_003551:478065:483150483150483854705Methanopyrus kandleri AV19, complete genomerRNA methylase9e-24110
NC_019907:539749:566717566717567505789Liberibacter crescens BT-1 chromosome, complete genometRNA:Cm32/Um32 methyltransferase2e-23109
NC_009635:61344:771067710677801696Methanococcus aeolicus Nankai-3 chromosome, complete genomeRNA methyltransferase2e-23109
NC_015636:1477221:148076114807611481456696Methanothermococcus okinawensis IH1 chromosome, complete genomeTrmH family RNA methyltransferase1e-22107
NC_013158:2714778:272878527287852729498714Halorhabdus utahensis DSM 12940, complete genomeRNA methyltransferase, TrmH family, group 11e-22107
NC_014122:247660:249270249270249950681Methanocaldococcus infernus ME chromosome, complete genomeRNA methyltransferase, TrmH family, group 12e-22106
NC_008818:1644223:164819016481901648909720Hyperthermus butylicus DSM 5456, complete genomerRNA methylase2e-2099.8
NC_015424:3112637:316944031694403170144705Aeromonas veronii B565 chromosome, complete genomeTrmH family RNA methyltransferase2e-2099.4
NC_017276:1206256:120555312055531206266714Sulfolobus islandicus REY15A chromosome, complete genomeRNA methyltransferase, TrmH family, group 17e-2097.8
NC_017275:1335763:133506013350601335773714Sulfolobus islandicus HVE10/4 chromosome, complete genomeRNA methyltransferase, TrmH family, group 17e-2097.8
NC_012726:1292671:130616813061681306881714Sulfolobus islandicus M.16.4 chromosome, complete genomeRNA methyltransferase, TrmH family, group 12e-1996.3
NC_012632:1399017:139831413983141399027714Sulfolobus islandicus M.16.27 chromosome, complete genomeRNA methyltransferase, TrmH family, group 12e-1996.3
NC_012588:1318879:131817613181761318889714Sulfolobus islandicus M.14.25 chromosome, complete genomeTrmH family RNA methyltransferase2e-1996.3
NC_012589:1395151:139444813944481395161714Sulfolobus islandicus L.S.2.15, complete genomeRNA methyltransferase, TrmH family, group 12e-1995.9
NC_012622:1294479:129377612937761294489714Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeRNA methyltransferase, TrmH family, group 12e-1995.9
NC_013769:1403324:140262114026211403334714Sulfolobus islandicus L.D.8.5 chromosome, complete genomeRNA methyltransferase, TrmH family, group 12e-1995.9
NC_009348:3261500:327725832772583277950693Aeromonas salmonicida subsp. salmonicida A449, complete genomeRNA methyltransferase1e-1893.6
NC_018868:2458122:246205524620552462747693Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeRNA methyltransferase1e-1893.6
NC_008820:808886:814391814391815140750Prochlorococcus marinus str. MIT 9303, complete genomeprobable tRNA/rRNA methyltransferase7e-1890.9
NC_015518:761380:762559762559763245687Acidianus hospitalis W1 chromosome, complete genomeRNA methyltransferase, TrmH family, group 13e-1789
NC_016915:162841:162168162168162860693Rickettsia rickettsii str. Hlp#2 chromosome, complete genometRNA/rRNA methyltransferase3e-1789
NC_015931:134601:152447152447153160714Pyrolobus fumarii 1A, complete genomeTrmH family RNA methyltransferase1e-1687
NC_014963:4569015:457354645735464574268723Terriglobus saanensis SP1PR4 chromosome, complete genometRNA/rRNA methyltransferase SpoU1e-1583.6
NC_019791:1346732:134673213467321347460729Caldisphaera lagunensis DSM 15908 chromosome, complete genomerRNA methylase9e-1477.4
NC_015435:1781492:179871217987121799410699Metallosphaera cuprina Ar-4 chromosome, complete genometRNA/rRNA methyltransferase (SpoU)6e-1374.7
NC_007181:459626:496001496001496708708Sulfolobus acidocaldarius DSM 639, complete genomeSpoU rRNA methylase2e-1169.7
NC_005213:202400:333862333862334560699Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein7e-1064.3
NC_005213:295994:333862333862334560699Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein7e-1064.3
NC_005213:295994:30893830893838041471477Nanoarchaeum equitans Kin4-M, complete genometRNA-Trp1e-0860.5
NC_005213:202400:30893830893838041471477Nanoarchaeum equitans Kin4-M, complete genometRNA-Trp1e-0860.5
NC_008009:1264791:126632112663211267106786Acidobacteria bacterium Ellin345, complete genomeRNA methyltransferase TrmH, group 31e-0653.9