Pre_GI: BLASTP Hits

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Query: NC_016822:3946500:3959293 Shigella sonnei 53G, complete genome

Start: 3959293, End: 3959940, Length: 648

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007384:3741708:374933337493333749980648Shigella sonnei Ss046, complete genomeputative transport ATPase2e-109394
CU928160:3709081:371924037192403719887648Escherichia coli IAI1 chromosome, complete genomeputative Mg(2+) transport ATPase inner membrane protein1e-108392
AC_000091:3976888:398451339845133985160648Escherichia coli W3110 DNA, complete genomepredicted Mg(2+) transport ATPase inner membrane protein1e-108392
CP002516:246767:254392254392255039648Escherichia coli KO11, complete genomeMgtC/SapB transporter1e-108392
NC_000913:3624826:365327836532783653925648Escherichia coli K12, complete genomepredicted Mg(2+) transport ATPase inner membrane protein1e-108392
AP010958:4313462:432246543224654323112648Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted Mg(2+) transport ATPase inner membrane protein1e-108392
NC_009800:3685651:369656636965663697213648Escherichia coli HS, complete genomeputative Mg2+ transporter-C (MgtC) family protein1e-108392
NC_010468:231000:238753238753239400648Escherichia coli ATCC 8739, complete genomeMgtC/SapB transporter1e-108392
NC_010473:3722571:375102337510233751670648Escherichia coli str. K-12 substr. DH10B, complete genomepredicted Mg(2+) transport ATPase inner membrane protein1e-108392
NC_011415:3887997:390039739003973901044648Escherichia coli SE11 chromosome, complete genomeputative Mg(2+) transport ATPase1e-108392
NC_016902:246767:254392254392255039648Escherichia coli KO11FL chromosome, complete genomeMgtC/SapB transporter1e-108392
NC_013364:4306000:431474443147444315391648Escherichia coli O111:H- str. 11128, complete genomeputative Mg(2+) transport ATPase inner membrane protein1e-108392
NC_013353:4313462:432246543224654323112648Escherichia coli O103:H2 str. 12009, complete genomeMg(2+) transport ATPase inner membrane protein1e-108392
NC_012967:3549880:358474635847463585393648Escherichia coli B str. REL606 chromosome, complete genomeputative Mg(2+) transport ATPase1e-108392
NC_012947:248000:255783255783256430648Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeMg(2+) transport ATPase1e-108392
NC_012759:3529657:354177235417723542419648Escherichia coli BW2952 chromosome, complete genomeputative Mg(2+) transport ATPase1e-108392
NC_011741:3709081:371924037192403719887648Escherichia coli IAI1 chromosome, complete genomeputative Mg(2+) transport ATPase1e-108392
NC_013361:4566779:457602445760244576671648Escherichia coli O26:H11 str. 11368 chromosome, complete genomeMg(2+) transport ATPase4e-108390
CU928145:3983432:402036340203634021010648Escherichia coli 55989 chromosome, complete genomeputative Mg(2+) transport ATPase inner membrane protein4e-108390
NC_011748:3983432:402036340203634021010648Escherichia coli 55989, complete genomeputative Mg(2+) transport ATPase4e-108390
NC_009801:3956917:396706639670663967713648Escherichia coli E24377A, complete genomeputative Mg2+ transporter-C (MgtC) family protein7e-108389
NC_010658:3622610:363305836330583633705648Shigella boydii CDC 3083-94, complete genomeputative Mg2+ transporter-C (MgtC) family protein8e-108389
NC_007613:3470314:350082135008213501468648Shigella boydii Sb227, complete genome1e-106385
CP002185:3822470:385103438510343851609576Escherichia coli W, complete genomepredicted Mg(2+) transport ATPase inner membrane protein9e-105379
NC_014618:4114004:413756841375684138224657Enterobacter cloacae SCF1 chromosome, complete genomeMgtC/SapB transporter1e-49196
NC_013508:1862896:188541718854171886070654Edwardsiella tarda EIB202, complete genomeputative Mg(2+) transport ATPase3e-49194
NC_008800:2298000:229861222986122299271660Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative Mg(2+) transport ATPase7e-48190
NC_008258:3581583:359257435925743593220647Shigella flexneri 5 str. 8401, complete genome6e-45180
NC_004741:4132056:414096141409614141535575Shigella flexneri 2a str. 2457T, complete genome2e-41169
NC_012121:1676367:168005416800541680725672Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein3e-34145
CP002207:725577:740105740105740767663Bacillus atrophaeus 1942, complete genomehypothetical protein1e-33143
NC_014639:725577:740105740105740767663Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein1e-33143
UCMB5137:808967:822816822816823478663Bacillus atrophaeus UCMB-5137hypothetical protein1e-33143
NC_014334:589526:594818594818595489672Lactobacillus casei str. Zhang chromosome, complete genomeputative Mg2+ Transporter-C (MgtC) Family2e-33142
NC_015160:2191919:219667521966752197337663Odoribacter splanchnicus DSM 20712 chromosome, complete genomeMgtC/SapB transporter3e-33141
NC_015759:760671:762920762920763579660Weissella koreensis KACC 15510 chromosome, complete genomeMg2 transporter-C (MgtC) family protein5e-31134
NC_013172:3141739:315204831520483152782735Brachybacterium faecium DSM 4810, complete genomeuncharacterized membrane protein2e-30132
NC_015277:6213304:621330462133046213975672Sphingobacterium sp. 21 chromosome, complete genomeMgtC/SapB transporter2e-30132
NC_009633:587562:588277588277589002726Alkaliphilus metalliredigens QYMF chromosome, complete genomeMgtC/SapB transporter6e-26117
NC_019897:3025871:304368730436873044415729Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein8e-26117
NC_014219:83888:101687101687102397711Bacillus selenitireducens MLS10 chromosome, complete genomeMgtC/SapB transporter2e-25115
NC_004193:79588:108544108544109242699Oceanobacillus iheyensis HTE831, complete genomecation-transporting ATPase3e-25114
NC_019897:73957:111616111616112362747Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein2e-24112
NC_018704:81733:106292106292106987696Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein4e-24111
NC_009922:2721343:274582227458222746499678Alkaliphilus oremlandii OhILAs, complete genomeMgtC/SapB transporter1e-23110
NC_020210:2969862:299506229950622995739678Geobacillus sp. GHH01, complete genomehypothetical protein2e-23109
NC_020134:1783000:1799561179956118007751215Clostridium stercorarium subsp. stercorarium DSM 8532, completeMgtC/SapB transporter family protein3e-23108
NC_010001:232976:251342251342252022681Clostridium phytofermentans ISDg, complete genomeMgtC/SapB transporter3e-23108
NC_014215:322362:325426325426326154729Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,MgtC, Mg2+ transporter protein6e-23107
NC_014152:1430156:143263214326321433303672Thermincola sp. JR, complete genomeMgtC/SapB transporter1e-21102
NC_017075:1233377:124732012473201248045726Rubrivivax gelatinosus IL144, complete genomehypothetical protein4e-2098.2
NC_014171:4708282:472512947251294725809681Bacillus thuringiensis BMB171 chromosome, complete genomeMgtC/SapB family membrane protein5e-2097.8
NC_017208:4845281:486119048611904861870681Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeMgtC/SapB family membrane protein6e-2097.4
NC_006270:718169:732641732641733333693Bacillus licheniformis ATCC 14580, complete genomeSapB9e-2097.1
NC_006322:717953:732424732424733116693Bacillus licheniformis ATCC 14580, complete genomeSapB9e-2097.1
NC_015275:1573916:157444415744441575139696Clostridium lentocellum DSM 5427 chromosome, complete genomeMgtC/SapB transporter6e-1994.4
NC_011567:2327870:234636823463682347045678Anoxybacillus flavithermus WK1, complete genomeUncharacterized membrane protein7e-1994
NC_010582:1771591:178767917876791788389711Streptococcus pneumoniae CGSP14, complete genomemgtC/SapB family protein1e-1893.2
NC_014652:757381:767295767295767945651Caldicellulosiruptor hydrothermalis 108 chromosome, completemgtc/sapb transporter1e-1893.2
NC_003454:822804:839330839330840064735Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeMGTC/SAPB Family membrane protein4e-1891.7
NC_014314:576465:639671639671640084414Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeMgtC/SapB transporter4e-1891.3
NC_003366:728859:734586734586735311726Clostridium perfringens str. 13, complete genomeprobable Mg2+ transport protein1e-1686.7
NC_003198:3881221:388361338836133884308696Salmonella enterica subsp. enterica serovar Typhi str. CT18,conserved hyopthetical protein1e-1686.7
NC_010159:2955562:296814229681422968840699Yersinia pestis Angola, complete genomeputative transporter, Mg2+ transporter-C (MgtC) family2e-1686.3
NC_009381:2009842:202182520218252022523699Yersinia pestis Pestoides F chromosome, complete genomeMg(2+) transport ATPase protein C2e-1686.3
NC_014029:2607666:262002126200212620719699Yersinia pestis Z176003 chromosome, complete genomeMg(2+) transport ATPase protein C2e-1686.3
NC_017265:1715035:172385417238541724552699Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Mg(2+) transport ATPase protein C2e-1686.3
NC_003143:1880000:188742218874221888132711Yersinia pestis CO92, complete genomeMg(2+) transport ATPase protein C2e-1686.3
NC_008261:676000:681964681964682686723Clostridium perfringens ATCC 13124, complete genomeMgtC family protein1e-1686.3
NC_016863:3905875:392578739257873926482696Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1Mg2+ transport protein2e-1685.9
NC_005810:1976000:198368619836861984396711Yersinia pestis biovar Microtus str. 91001, complete genomeMg(2+) transport ATPase protein C2e-1685.9
NC_013894:1194458:119624511962451196913669Thermocrinis albus DSM 14484 chromosome, complete genomeMgtC/SapB transporter2e-1685.9
NC_014618:1103239:110423911042391104922684Enterobacter cloacae SCF1 chromosome, complete genomeMgtC/SapB transporter3e-1685.5
NC_008262:654000:659866659866660588723Clostridium perfringens SM101, complete genomecation transport ATPase yqgG2e-1685.5
NC_012125:3879917:389773138977313898408678Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1685.5
NC_009485:1604942:164236016423601643058699Bradyrhizobium sp. BTAi1 chromosome, complete genomeMgtC-magnesium transport family protein4e-1684.7
NC_010498:1117938:112152611215261122239714Escherichia coli SMS-3-5, complete genomemgtC family protein9e-1683.6
NC_009348:2738742:274520127452012745689489Aeromonas salmonicida subsp. salmonicida A449, complete genomeMg2+ transporter4e-1581.3
NC_012731:2739964:274333527433352744030696Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative Mg(2+) transport ATPase5e-1581.3
NC_016845:2781438:278480827848082785488681Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,MgtC family magnesium transporter5e-1581.3
NC_010676:897801:915913915913916620708Burkholderia phytofirmans PsJN chromosome 2, complete sequenceMgtC/SapB transporter1e-1480.1
NC_007952:1293024:131401613140161314723708Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative Mg+2 transporter, MgtC/SapB family2e-1479.3
NC_013440:1624561:164090416409041641377474Haliangium ochraceum DSM 14365, complete genomeMgtC/SapB transporter3e-1478.6
NC_011001:2085986:208598620859862086693708Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative Mg(2+) transport ATPase5e-1477.8
NC_010515:2691000:271977827197782720485708Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceMgtC/SapB transporter5e-1477.8
NC_007511:1147696:117849511784951179202708Burkholderia sp. 383 chromosome 2, complete sequenceMgtC/SapB transporter8e-1477
NC_014041:4335948:435022643502264350672447Zunongwangia profunda SM-A87 chromosome, complete genomemembrane protein, MgtC1e-1376.3
NC_011206:123791:146114146114146818705Acidithiobacillus ferrooxidans ATCC 53993, complete genomeMgtC/SapB transporter2e-1375.9
NC_009089:3935500:394606339460633946749687Clostridium difficile 630, complete genomeMagnesium transporting ATPase protein C7e-1373.9
NC_014624:1369642:138427013842701384953684Eubacterium limosum KIST612 chromosome, complete genomemagnesium transporting ATPase protein C6e-1270.9
NC_009138:1583988:159425115942511594691441Herminiimonas arsenicoxydans, complete genomeputative MgtC/SapB transporter (partial)7e-1270.9
NC_005125:637333:642318642318642806489Gloeobacter violaceus PCC 7421, complete genomeprobable transport ATPase2e-1168.9
NC_011004:2457778:247669324766932477169477Rhodopseudomonas palustris TIE-1, complete genomeMgtC/SapB transporter4e-1168.2
NC_010625:1513436:153308215330821533576495Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceMgtC/SapB transporter8e-1167.4
NC_014640:4293430:429539642953964296085690Achromobacter xylosoxidans A8 chromosome, complete genomeMgtC family protein 26e-1064.3
NC_009659:1984980:199812419981241998570447Janthinobacterium sp. Marseille chromosome, complete genomeMgtC family protein2e-0962.4
NC_011992:3752867:376314037631403763868729Acidovorax ebreus TPSY, complete genomeMgtC/SapB transporter2e-0859.3
NC_015914:5470926:547549154754915475919429Cyclobacterium marinum DSM 745 chromosome, complete genomeMgtC/SapB transporter2e-0652.4