Pre_GI: BLASTP Hits

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Query: NC_016822:15401:33679 Shigella sonnei 53G, complete genome

Start: 33679, End: 34593, Length: 915

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007384:16500:344593445935373915Shigella sonnei Ss046, complete genomehypothetical protein8e-169592
NC_011741:11381:292052920530119915Escherichia coli IAI1 chromosome, complete genomeribonucleoside hydrolase RihC3e-168591
NC_009800:12162:305523055231466915Escherichia coli HS, complete genomenonspecific ribonucleoside hydrolase RihC3e-168591
CU928160:11381:292052920530119915Escherichia coli IAI1 chromosome, complete genomeribonucleoside hydrolase 33e-168591
CP002185:11921:304843048431398915Escherichia coli W, complete genomeribonucleoside hydrolase 33e-168591
AP010958:12660:304833048331397915Escherichia coli O103:H2 str. 12009 DNA, complete genomeribonucleoside hydrolase 37e-168589
NC_013353:12660:304833048331397915Escherichia coli O103:H2 str. 12009, complete genomeribonucleoside hydrolase 37e-168589
NC_009801:11921:304883048831402915Escherichia coli E24377A, complete genomenonspecific ribonucleoside hydrolase RihC3e-167587
NC_013364:11382:291992919930113915Escherichia coli O111:H- str. 11128, complete genomeribonucleoside hydrolase 34e-167587
NC_013361:11382:292142921430128915Escherichia coli O26:H11 str. 11368 chromosome, complete genomeribonucleoside hydrolase RihC4e-167587
NC_011748:11394:292172921730131915Escherichia coli 55989, complete genomeribonucleoside hydrolase RihC4e-167587
CU928145:11394:292172921730131915Escherichia coli 55989 chromosome, complete genomeribonucleoside hydrolase 34e-167587
NC_011751:12000:316133161332527915Escherichia coli UMN026 chromosome, complete genomeribonucleoside hydrolase RihC3e-166584
NC_011415:11381:292032920330117915Escherichia coli SE11 chromosome, complete genomeribonucleoside hydrolase RihC2e-166584
NC_011750:12047:354673546736381915Escherichia coli IAI39 chromosome, complete genomeribonucleoside hydrolase RihC1e-165582
NC_002695:12000:316673166732581915Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-165582
NC_002655:12000:316683166832582915Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-165582
NC_011353:12000:316683166832582915Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeribonucleoside hydrolase RihC1e-165582
NC_013008:11938:316683166832582915Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeribonucleoside hydrolase RihC1e-165582
NC_013941:12000:316493164932563915Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeNon-specific ribonucleoside hydrolase rihC1e-165582
NC_012967:12161:313653136532279915Escherichia coli B str. REL606 chromosome, complete genomeribonucleoside hydrolase RihC4e-163573
NC_013850:4612812:462805846280584628972915Klebsiella variicola At-22 chromosome, complete genomeInosine/uridine-preferring nucleoside hydrolase6e-137486
NC_011283:4767269:478251547825154783429915Klebsiella pneumoniae 342 chromosome, complete genomeribonucleoside hydrolase RihC1e-135482
NC_013199:392450:392450392450393385936Lactobacillus rhamnosus Lc 705, complete genomeInosine-uridine nucleoside N-ribohydrolase4e-59228
NC_015602:1143038:114561211456121146538927Lactobacillus kefiranofaciens ZW3 chromosome, complete genomenucleoside hydrolase1e-54213
NC_020207:1346579:136588513658851366805921Enterococcus faecium NRRL B-2354, complete genomeInosine-uridine preferring nucleoside hydrolase2e-50199
NC_013517:3846747:385068338506833851609927Sebaldella termitidis ATCC 33386, complete genomeRibosylpyrimidine nucleosidase9e-49194
NC_013517:825100:829422829422830354933Sebaldella termitidis ATCC 33386, complete genomeInosine/uridine-preferring nucleoside hydrolase1e-48193
NC_014150:2399997:240754324075432408475933Brachyspira murdochii DSM 12563 chromosome, complete genomeRibosylpyrimidine nucleosidase1e-41170
NC_015856:3436951:3438140343814034392101071Collimonas fungivorans Ter331 chromosome, complete genomeinosine-uridine preferring nucleoside hydrolase7e-41167
NC_009342:1570000:157208715720871573025939Corynebacterium glutamicum R chromosome, complete genomehypothetical protein2e-40166
NC_018720:1510084:153408415340841535028945Bifidobacterium asteroides PRL2011 chromosome, complete genomeinosine-uridine preferring nucleoside hydrolase2e-39163
NC_012880:1711062:171011517101151711065951Dickeya dadantii Ech703, complete genomeRibosylpyrimidine nucleosidase1e-38160
NC_002663:1988000:199192819919281992860933Pasteurella multocida subsp. multocida str. Pm70, complete genomeIunH2e-38159
NC_012814:1682500:168723416872341688175942Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein1e-37157
NC_012815:1682872:168695116869511687892942Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein1e-37157
NC_011835:813345:818003818003818944942Bifidobacterium animalis subsp. lactis AD011 chromosome, completeInosine-uridine nucleoside N-ribohydrolase1e-37157
NC_017214:379728:384388384388385329942Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeInosine-uridine preferring nucleoside hydrolase1e-37157
NC_017215:1687161:169182116918211692762942Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Purine nucleosidase1e-37157
NC_017216:1682219:168687916868791687820942Bifidobacterium animalis subsp. lactis BLC1, complete genomeinosine-uridine preferring nucleoside hydrolase1e-37157
NC_017217:1688441:169252016925201693461942Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein1e-37157
NC_014644:1363445:136858213685821369520939Gardnerella vaginalis ATCC 14019 chromosome, complete genomeribosylpyrimidine nucleosidase8e-36150
NC_009092:4585784:458973045897304590698969Shewanella loihica PV-4, complete genomeInosine/uridine-preferring nucleoside hydrolase7e-35147
NC_014483:5015890:501753450175345018463930Paenibacillus polymyxa E681 chromosome, complete genomeInosine-uridine preferring nucleoside hydrolase1e-34146
NC_014100:1144463:116800311680031168974972Caulobacter segnis ATCC 21756 chromosome, complete genomeinosine/uridine-preferring nucleoside hydrolase4e-34145
NC_015683:2176156:218119721811972182189993Corynebacterium ulcerans BR-AD22 chromosome, complete genomeinosine-uridine preferring nucleoside hydrolase7e-34144
NC_012880:1711062:171106217110621712015954Dickeya dadantii Ech703, complete genomeInosine/uridine-preferring nucleoside hydrolase9e-34144
NC_020302:2190500:220844822084482209392945Corynebacterium halotolerans YIM 70093 = DSM 44683, completenucleoside hydrolase7e-33141
NC_007802:3252300:327918432791843280140957Jannaschia sp. CCS1, complete genomeInosine/uridine-preferring nucleoside hydrolase7e-32137
NC_017275:698854:718145718145719068924Sulfolobus islandicus HVE10/4 chromosome, complete genomeinosine-uridine preferring nucleoside hydrolase2e-29129
NC_011959:972798:993689993689994618930Thermomicrobium roseum DSM 5159, complete genomeinosine-uridine preferring nucleoside hydrolase6e-29128
NC_008148:1859888:191979519197951920730936Rubrobacter xylanophilus DSM 9941, complete genomeInosine/uridine-preferring nucleoside hydrolase4e-29128
NC_015518:761380:824749824749825687939Acidianus hospitalis W1 chromosome, complete genomeinosine/uridine-preferring nucleoside hydrolase2e-27123
NC_014831:285759:286728286728287681954Thermaerobacter marianensis DSM 12885 chromosome, complete genomeInosine/uridine-preferring nucleoside hydrolase4e-24112
NC_013714:2294342:229588522958852296841957Bifidobacterium dentium Bd1, complete genomeInosine-uridine preferring nucleoside hydrolase5e-24111
NC_002754:435745:438552438552439487936Sulfolobus solfataricus P2, complete genomePurine nucleosidase, putative (iunH-1)8e-24110
NC_018720:1336839:134976913497691350713945Bifidobacterium asteroides PRL2011 chromosome, complete genomeinosine-uridine nucleoside N-ribohydrolase6e-23108
NC_013769:1591000:160751616075161608451936Sulfolobus islandicus L.D.8.5 chromosome, complete genomeinosine/uridine-preferring nucleoside hydrolase4e-23108
NC_014550:3534000:3541523354152335426201098Arthrobacter arilaitensis Re117, complete genomeputative purine nucleosidase9e-23107
NC_012814:1757753:176363417636341764587954Bifidobacterium animalis subsp. lactis Bl-04, complete genomeputative nucleoside hydrolase protein9e-23107
NC_012815:1757992:176340617634061764359954Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeputative nucleoside hydrolase protein9e-23107
NC_015848:3851230:387579138757913876717927Mycobacterium canettii CIPT 140010059, complete genomeputative nucleoside hydrolase IUNH1e-22107
NC_008262:2169262:217713021771302178110981Clostridium perfringens SM101, complete genomenucleoside hydrolase, IUNH family2e-22106
NC_019950:3818000:383626438362643837190927Mycobacterium canettii CIPT 140060008 complete genomePutative nucleoside hydrolase IunH (purine nucleosidase)5e-22105
NC_003366:2286083:229397422939742294954981Clostridium perfringens str. 13, complete genomeprobable nucleoside hydrolase4e-22105
NC_014306:642152:663821663821664795975Erwinia billingiae Eb661, complete genomenucleoside hydrolase2e-1997.1
NC_015145:1045264:107478110747811075776996Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeinosine-uridine nucleoside N-ribohydrolase2e-1893.2
NC_015951:71697:838448384484824981Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeInosine/uridine-preferring nucleoside hydrolase2e-1790.1
NC_013526:439813:460948460948461859912Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeInosine/uridine-preferring nucleoside hydrolase5e-1788.6
NC_006274:4910465:491575149157514916701951Bacillus cereus E33L, complete genomeinosine-uridine preferring nucleoside hydrolase3e-1685.9
NC_010184:4879552:488949248894924890442951Bacillus weihenstephanensis KBAB4, complete genomeInosine/uridine-preferring nucleoside hydrolase5e-1685.5
NC_014335:4800500:480838748083874809337951Bacillus cereus biovar anthracis str. CI chromosome, completeinosine-uridine preferring nucleoside hydrolase5e-1685.1
NC_004722:5027762:503670850367085037658951Bacillus cereus ATCC 14579, complete genomeInosine-uridine preferring nucleoside hydrolase8e-1684.3
NC_016771:4821000:482378448237844824734951Bacillus cereus NC7401, complete genomeinosine-uridine preferring nucleoside hydrolase family protein9e-1684.3
NC_011658:4866184:487146148714614872411951Bacillus cereus AH187 chromosome, complete genomeinosine-uridine preferring nucleoside hydrolase family protein9e-1684.3
NC_014335:3288500:3304804330480433058081005Bacillus cereus biovar anthracis str. CI chromosome, completeinosine-uridine preferring nucleoside hydrolase1e-1584
NC_011969:4802500:480509248050924806042951Bacillus cereus Q1 chromosome, complete genomeinosine-uridine preferring nucleoside hydrolase family protein1e-1584
NC_011725:5043198:504840750484075049357951Bacillus cereus B4264 chromosome, complete genomeinosine-uridine preferring nucleoside hydrolase1e-1583.6
NC_010498:1117938:1120428112042811214621035Escherichia coli SMS-3-5, complete genomeinosine-uridine preferring nucleoside hydrolase2e-1583.6
NC_016641:4011000:402714140271414028055915Paenibacillus terrae HPL-003 chromosome, complete genomeputative nucleoside hydrolase2e-1583.2
NC_017200:4915780:492090649209064921856951Bacillus thuringiensis serovar finitimus YBT-020 chromosome,inosine-uridine preferring nucleoside hydrolase family protein3e-1582.8
NC_011773:4914601:491987749198774920827951Bacillus cereus AH820 chromosome, complete genomeinosine-uridine preferring nucleoside hydrolase family protein3e-1582.8
NC_005957:4850659:486322948632294864179951Bacillus thuringiensis serovar konkukian str. 97-27, completeinosine-uridine preferring nucleoside hydrolase3e-1582.8
NC_011772:4994500:500217350021735003123951Bacillus cereus G9842, complete genomeinosine-uridine preferring nucleoside hydrolase family protein4e-1582.4
NC_015389:1610756:161989716198971620844948Coriobacterium glomerans PW2 chromosome, complete genomeInosine/uridine-preferring nucleoside hydrolase5e-1582
NC_017208:5096759:510198151019815102931951Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeinosine-uridine preferring nucleoside hydrolase7e-1581.6
NC_003909:4831000:483379748337974834747951Bacillus cereus ATCC 10987, complete genomepurine nucleoside hydrolase8e-1581.3
NC_012472:4867210:487235448723544873304951Bacillus cereus 03BB102, complete genomeinosine-uridine preferring nucleoside hydrolase family protein2e-1479.7
NC_008600:4868000:487057848705784871528951Bacillus thuringiensis str. Al Hakam, complete genomeinosine-uridine preferring nucleoside hydrolase2e-1479.7
NC_016779:4825599:483072948307294831679951Bacillus cereus F837/76 chromosome, complete genomeInosine-uridine preferring nucleoside hydrolase2e-1479.7
NC_015859:1147537:114831511483151149301987Corynebacterium variabile DSM 44702 chromosome, complete genomeinosine-uridine preferring nucleoside hydrolase3e-1479
NC_012803:691215:7206967206967217661071Micrococcus luteus NCTC 2665, complete genomeInosine-uridine nucleoside N-ribohydrolase8e-1477.8
NC_006270:741731:745885745885746838954Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-1170.9
NC_006322:741516:745669745669746622954Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-1170.9
NC_016641:1148220:116489411648941165850957Paenibacillus terrae HPL-003 chromosome, complete genomeinosine-uridine nucleoside N-ribohydrolase2e-1169.7
NC_014622:5378000:539628153962815397237957Paenibacillus polymyxa SC2 chromosome, complete genomeinosine-uridine preferring nucleoside hydrolase3e-1169.3
NC_009848:720510:723766723766724719954Bacillus pumilus SAFR-032, complete genomepurine nucleosidase1e-1067
NC_014623:464324:4643244643244653881065Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeinosine/uridine-preferring nucleoside hydrolase3e-0859.7
NC_013729:4871430:487058548705854871433849Kribbella flavida DSM 17836, complete genomeInosine/uridine-preferring nucleoside hydrolase1e-0653.9
NC_014960:3410741:341185934118593412773915Anaerolinea thermophila UNI-1, complete genomeputative ribonucleoside hydrolase3e-0652.8
NC_017033:1672313:169039916903991691379981Frateuria aurantia DSM 6220 chromosome, complete genomeInosine-uridine nucleoside N-ribohydrolase4e-0652.4
NC_014655:379937:392837392837393781945Leadbetterella byssophila DSM 17132 chromosome, complete genomeinosine/uridine-preferring nucleoside hydrolase4e-0652.4