Pre_GI: BLASTP Hits

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Query: NC_016822:15401:19121 Shigella sonnei 53G, complete genome

Start: 19121, End: 19510, Length: 390

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007384:16500:199001990020289390Shigella sonnei Ss046, complete genomehypothetical protein3e-71266
NC_016822:4889656:4907649490764949088241176Shigella sonnei 53G, complete genomeISCps8, transposase2e-62237
NC_016822:2940000:2961415296141529625901176Shigella sonnei 53G, complete genomeISCps8, transposase2e-62237
NC_016822:2940000:2941949294194929431241176Shigella sonnei 53G, complete genomeISCps8, transposase2e-62237
NC_010658:4257310:4262305426230542634801176Shigella boydii CDC 3083-94, complete genometransposase2e-62237
NC_007613:4119771:4121697412169741228241128Shigella boydii Sb227, complete genomeputative transposase2e-62236
NC_010627:127968:1284341284341295641131Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencetransposase IS116/IS110/IS902 family protein3e-47186
NC_009255:1105786:1132044113204411331231080Burkholderia vietnamiensis G4 chromosome 2, complete sequencetransposase IS116/IS110/IS902 family protein2e-46184
NC_010805:575709:5824475824475835261080Burkholderia multivorans ATCC 17616 chromosome 2, completeISBmu29 transposase2e-46184
NC_010814:4099:8837883799461110Geobacter lovleyi SZ, complete genometransposase IS116/IS110/IS902 family protein4e-26116
NC_007517:3151742:315819431581943159192999Geobacter metallireducens GS-15, complete genomeIS111A/IS1328/IS1533/IS116/IS110/IS902 transposase3e-25113
NC_009717:271385:2817592817592828711113Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequencetransposase IS116/IS110/IS902 family protein4e-25113
NC_011751:3453683:3474872347487234760051134Escherichia coli UMN026 chromosome, complete genometransposase, IS110 family7e-22102
NC_010511:3106418:3123659312365931247681110Methylobacterium sp. 4-46 chromosome, complete genometransposase IS116/IS110/IS902 family protein1e-21102
NC_011601:1114104:114429811442981144840543Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase1e-21101
NC_009786:43331:4479344793459221130Escherichia coli E24377A plasmid pETEC_80, complete sequence1e-21101
NC_007946:4779745:4811641481164148127741134Escherichia coli UTI89, complete genomehypothetical protein8e-2199
NC_008510:2605500:2610857261085726119511095Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, IS15332e-1994.4
NC_011753:2018500:2024849202484920260031155Vibrio splendidus LGP32 chromosome 1, complete genomeTransposase of insertion sequence ISVisp2 ; IS110 family subgroup IS11112e-1994
NC_008508:2572450:2577596257759625786901095Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,Transposase, IS15333e-1993.6
NC_008510:3189349:3195862319586231969561095Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, IS15332e-1477.8
NC_008510:3189349:3205651320565132067451095Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, IS15332e-1374.7
NC_009442:1158268:1172713117271311738401128Streptococcus suis 05ZYH33 chromosome, complete genometransposase3e-1373.9
NC_008510:3189349:3210531321053132117191189Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,8e-1269.3
NC_014387:1362440:1385735138573513868531119Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeIS110 family transposase3e-1167.4
NC_007953:811500:825335825335826225891Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative transposase IS116/IS110/IS9024e-1166.6
NC_016907:1:8002800290361035Gordonia polyisoprenivorans VH2 plasmid p174, complete sequenceputative transposase2e-1064.3
NC_016907:152500:1668591668591682711413Gordonia polyisoprenivorans VH2 plasmid p174, complete sequenceputative transposase6e-1062.8
NC_015500:159199:1693661693661704961131Treponema brennaborense DSM 12168 chromosome, complete genometransposase IS116/IS110/IS902 family protein1e-0858.2
NC_015500:78223:9106691066921961131Treponema brennaborense DSM 12168 chromosome, complete genometransposase IS116/IS110/IS902 family protein1e-0858.2
NC_015311:145215:1452151452151462941080Prevotella denticola F0289 chromosome, complete genometransposase, IS116/IS110/IS902 family2e-0857.8
NC_014844:3469848:3474382347438234754491068Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS116/IS110/IS902 family protein4e-0857
NC_014844:3015738:3027095302709530281621068Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS116/IS110/IS902 family protein4e-0857
NC_014844:903877:9130439130439141101068Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS116/IS110/IS902 family protein4e-0857
NC_014844:3015738:3022190302219030231911002Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS116/IS110/IS902 family protein5e-0856.6
NC_013165:413098:414451414451415236786Slackia heliotrinireducens DSM 20476, complete genometransposase1e-0652
NC_014722:1467996:1478982147898214801361155Burkholderia rhizoxinica HKI 454, complete genometransposase2e-0650.8
NC_015500:1337180:1345716134571613468461131Treponema brennaborense DSM 12168 chromosome, complete genometransposase IS116/IS110/IS902 family protein4e-0650.1