Pre_GI: BLASTN Hits

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Query: NC_016812:4246542 Sinorhizobium fredii HH103, complete genome

Start: 4246542, End: 4278599, Length: 32058

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003047:33600003360000341859958600Sinorhizobium meliloti 1021, complete genome0831BLASTN svgBLASTP svg
NC_012586:89714889714892110623959Rhizobium sp. NGR234 plasmid pNGR234b, complete sequence5e-135490BLASTN svgBLASTP svg
NC_012587:2326000*2326000234764221643Rhizobium sp. NGR234, complete genome2e-118434BLASTN svgBLASTP svg
NC_003063:20593112059311208899929689Agrobacterium tumefaciens str. C58 chromosome linear, complete9e-115422BLASTN svgBLASTP svg
NC_002678:37015003701500374659945100Mesorhizobium loti MAFF303099, complete genome4e-52214BLASTN svgBLASTP svg
NC_003911:253400*25340027913725738Silicibacter pomeroyi DSS-3, complete genome1e-43186BLASTN svgBLASTP svg
NC_007958:396439*39643942143724999Rhodopseudomonas palustris BisB5, complete genome4e-43184BLASTN svgBLASTP svg
NC_007760:47510004751000477056419565Anaeromyxobacter dehalogenans 2CP-C, complete genome1e-30143BLASTN svgBLASTP svg
NC_014165:25330402533040256380530766Thermobispora bispora DSM 43833 chromosome, complete genome2e-29139BLASTN svgBLASTP svg
NC_015947:22318422318424748524302Burkholderia sp. JV3 chromosome, complete genome2e-23119BLASTN svgBLASTP svg
NC_011145:47975484797548481912621579Anaeromyxobacter sp. K, complete genome3e-22115BLASTN svgBLASTP svg
NC_015675:2567000*2567000258988822889Mesorhizobium opportunistum WSM2075 chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_013169:21045972104597212575721161Kytococcus sedentarius DSM 20547, complete genome7e-20107BLASTN svgBLASTP svg
NC_006177:12546351254635128152926895Symbiobacterium thermophilum IAM 14863, complete genome1e-18103BLASTN svgBLASTP svg
NC_015671:2371632*2371632239461522984Cellvibrio gilvus ATCC 13127 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_012724:19147401914740194049525756Burkholderia glumae BGR1 chromosome 1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_007492:29940362994036302311329078Pseudomonas fluorescens PfO-1, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_014323:38953763895376391522819853Herbaspirillum seropedicae SmR1 chromosome, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_019973:2417000*2417000243959922600Mesorhizobium australicum WSM2073, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_018750:4311300*4311300432914617847Streptomyces venezuelae ATCC 10712, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_002678:48857904885790493387048081Mesorhizobium loti MAFF303099, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_003305:112033020330Agrobacterium tumefaciens str. C58 chromosome linear, complete6e-1177.8BLASTN svgBLASTP svg
NC_012791:26229232622923264743824516Variovorax paradoxus S110 chromosome 1, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_012880:2399205*2399205242050221298Dickeya dadantii Ech703, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014532:17139871713987173773623750Halomonas elongata DSM 2581, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007435:14469161446916149170044785Burkholderia pseudomallei 1710b chromosome II, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_005773:5149768*5149768521141661649Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_003295:85677585677588209925325Ralstonia solanacearum GMI1000, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007005:5367454*5367454539426326810Pseudomonas syringae pv. syringae B728a, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014923:2439197*2439197246272623530Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete6e-0867.9BLASTN svgBLASTP svg
NC_012586:92209592209594950427410Rhizobium sp. NGR234 plasmid pNGR234b, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_009142:54257635425763544844722685Saccharopolyspora erythraea NRRL 2338, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_004578:93486793486796406929203Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012587:3613162*3613162363761324452Rhizobium sp. NGR234, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015954:10514401051440107644325004Halophilic archaeon DL31 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020260:440000*44000046819628197Cronobacter sakazakii Sp291, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012796:4075583*40755834200283124701Desulfovibrio magneticus RS-1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008543:22206982220698226060739910Burkholderia cenocepacia HI2424 chromosome 2, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_009078:27187412718741276343044690Burkholderia pseudomallei 1106a chromosome II, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_012587:71312471312473838525262Rhizobium sp. NGR234, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_013202:906044*90604493762031577Halomicrobium mukohataei DSM 12286, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014363:16805781680578170738226805Olsenella uli DSM 7084 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_020064:1409596*1409596145680247207Serratia marcescens FGI94, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007802:3575739*3575739362449148753Jannaschia sp. CCS1, complete genome4e-0661.9BLASTN svgBLASTP svg