Pre_GI: BLASTP Hits

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Query: NC_016810:4573172:4580663 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 4580663, End: 4580932, Length: 270

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:4513106:452051945205194520788270Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein9e-45178
NC_016857:4573173:458066445806644580933270Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein9e-45178
NC_016856:4563435:457291345729134573182270Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein9e-45178
NC_003197:4551880:456008345600834560352270Salmonella typhimurium LT2, complete genomehypothetical protein9e-45178
NC_017046:4571833:457932445793244579512189Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein3e-29127
NC_016860:4649274:465747746574774657665189Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-29127
NC_011205:4564645:457412345741234574311189Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-28122
NC_004631:4381724:438912843891284389511384Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-25112
NC_003198:4397074:440447844044784404861384Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-25112
NC_015761:4188250:4188250418825041978439594Salmonella bongori NCTC 12419, complete genomelarge repetitive protein8e-23105
NC_006905:4486433:449414444941444494533390Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein3e-1993.6
NC_011147:4297513:430696643069664307280315Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-1993.6
NC_012125:4481808:448951944895194489854336Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein4e-1993.2
NC_016831:4367000:437489643748964375231336Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-1993.2
NC_010102:4477836:448554744855474485684138Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-1475.5
NC_016832:4368948:437635243763524376615264Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1064.3