Pre_GI: BLASTP Hits

Some Help

Query: NC_016810:3993863:4000107 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 4000107, End: 4000466, Length: 360

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:3933848:394009339400933940452360Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein5e-66249
NC_016860:3995445:400169040016904002049360Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein5e-66249
NC_016856:3985597:399248639924863992845360Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein5e-66249
NC_003197:3971905:397879439787943979153360Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein5e-66249
NC_017046:3991551:399889039988903999294405Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-66248
NC_016857:3993864:400006340000634000467405Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein5e-66248
NC_011083:3985618:399295839929583993362405Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein5e-66248
NC_011094:3853036:385923638592363859640405Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-64244
NC_011149:3895921:390330639033063903665360Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein2e-64243
NC_011080:3941909:394815439481543948513360Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein2e-64243
NC_012125:3905782:391198239119823912386405Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein6e-64242
NC_006905:3913988:391719239171923917596405Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein6e-64242
NC_010102:3919999:392688839268883927247360Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-63239
NC_006511:3759550:376688137668813767285405Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4e-60229
NC_012912:4167429:418474241847424185101360Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF10448e-47185
NC_014837:1144500:115997111599711160330360Pantoea sp. At-9b chromosome, complete genomehypothetical protein6e-42169
NC_013941:4470932:451580045158004516153354Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-40164
NC_013008:4643825:468745246874524687805354Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-40164
NC_011353:4688000:473141147314114731764354Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-40164
NC_002655:4653160:469729046972904697643354Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-40164
NC_002695:4584177:462830746283074628660354Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-40164
NC_014562:3985500:400259440025944002863270Pantoea vagans C9-1 chromosome, complete genomehypothetical protein2e-33140
NC_011750:4390000:443681144368114437089279Escherichia coli IAI39 chromosome, complete genomehypothetical protein5e-29125
NC_003198:3855157:386966138696613870046386Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-1890.9
NC_019940:3518670:353231035323103532696387Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein2e-1374.3
NC_007512:2024880:202925520292552029773519Pelodictyon luteolum DSM 273, complete genomehypothetical protein7e-1372.8
NC_016616:2644883:265216726521672652547381Dechlorosoma suillum PS chromosome, complete genomehypothetical protein3e-1063.9
NC_015388:2211828:222278222227822223162381Desulfobacca acetoxidans DSM 11109 chromosome, complete genomehypothetical protein4e-0960.1
NC_015559:3645181:366295236629523663326375Marinomonas posidonica IVIA-Po-181 chromosome, complete genomehypothetical protein5e-0753.1
NC_015276:3829059:383354038335403833914375Marinomonas mediterranea MMB-1 chromosome, complete genomehypothetical protein1e-0652