Pre_GI: BLASTP Hits

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Query: NC_016810:3993863:3996858 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 3996858, End: 3997151, Length: 294

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:3991551:399568639956863995979294Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-52204
NC_003197:3971905:397554439755443975837294Salmonella typhimurium LT2, complete genomeputative inner membrane protein1e-52204
NC_004631:3841975:385844838584483858741294Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative secreted protein1e-52204
NC_011083:3985618:398975339897533990046294Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-52204
NC_003198:3855157:387295838729583873251294Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative secreted protein1e-52204
NC_016856:3985597:398923639892363989529294Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein1e-52204
NC_016857:3993864:399685939968593997152294Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein1e-52204
NC_016860:3995445:399844039984403998733294Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-52204
NC_016863:3933848:393684339368433937136294Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein1e-52204
NC_011149:3895921:390005639000563900349294Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein5e-52202
NC_010102:3919999:392363839236383923931294Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-52202
NC_011080:3941909:394490439449043945197294Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein4e-52202
NC_006905:3913988:391398839139883914281294Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein4e-52202
NC_006511:3759550:376368537636853763978294Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative secreted protein4e-52202
NC_011147:3755725:375936437593643759657294Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-52202
NC_012125:3905782:390877739087773909070294Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-52202
NC_011094:3853036:385603138560313856324294Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-45181
CP002185:4035502:406237340623734062666294Escherichia coli W, complete genomepredicted protein3e-37153
NC_017328:3935185:393658139365813936874294Shigella flexneri 2002017 chromosome, complete genomeputative transport protein7e-37152
NC_004337:3590323:391092239109223911215294Shigella flexneri 2a str. 301, complete genomeputative transport protein7e-37152
NC_010498:4072681:409656040965604096853294Escherichia coli SMS-3-5, complete genomehypothetical protein4e-34143
NC_011750:4390000:441893744189374419299363Escherichia coli IAI39 chromosome, complete genomehypothetical protein3e-34143
NC_011601:4096427:414025541402554140614360Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein6e-34142
NC_013941:4470932:451397345139734514335363Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-33141
NC_002655:4653160:469546346954634695825363Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-33141
NC_002695:4584177:462648046264804626842363Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-33141
NC_013008:4643825:468569446856944685987294Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-33141
NC_011353:4688000:472965347296534729946294Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-33141
NC_009792:4693152:471558247155824715944363Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-33140
NC_011751:4293966:430071843007184301080363Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-33140