Pre_GI: BLASTP Hits

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Query: NC_016810:2871689:2923005 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 2923005, End: 2923880, Length: 876

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2844883:286891728689172869792876Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative integrase1e-170598
NC_016860:2917910:292400529240052924880876Salmonella enterica subsp. enterica serovar Typhimurium strDNA-binding prophage protein1e-170598
NC_016857:2871689:292300529230052923880876Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative integrase1e-170598
NC_016856:2896630:292066429206642921539876Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative integrase1e-170598
NC_003197:2894344:290043929004392901314876Salmonella typhimurium LT2, complete genomeputative integrase1e-170598
NC_011083:2847318:287494528749452875820876Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA-binding prophage protein1e-170598
NC_017046:2896651:292174629217462922621876Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA-binding bacteriophage protein4e-170597
NC_011149:1987291:201844220184422019314873Salmonella enterica subsp. enterica serovar Agona str. SL483,DNA-binding prophage protein2e-93342
NC_013592:4295449:430119543011954302076882Dickeya dadantii Ech586, complete genomeintegrase domain protein SAM domain protein4e-93341
NC_010159:1417993:142266414226641423551888Yersinia pestis Angola, complete genomeputative DNA-binding prophage protein7e-93340
NC_008150:650899:655248655248656135888Yersinia pestis Antiqua, complete genomeputative DNA-binding prophage protein7e-93340
NC_008149:3251196:326447532644753265362888Yersinia pestis Nepal516, complete genomeDNA-binding prophage protein7e-93340
NC_009381:2939782:295306029530602953947888Yersinia pestis Pestoides F chromosome, complete genomeputative DNA-binding prophage protein7e-93340
NC_014029:1283500:128770912877091288596888Yersinia pestis Z176003 chromosome, complete genomeDNA-binding prophage protein7e-93340
NC_017154:1225500:122980212298021230689888Yersinia pestis D106004 chromosome, complete genomeDNA-binding prophage protein7e-93340
NC_017160:1507500:152092215209221521809888Yersinia pestis D182038 chromosome, complete genomeDNA-binding prophage protein7e-93340
NC_017168:4155143:416052841605284161415888Yersinia pestis A1122 chromosome, complete genomeputative DNA-binding prophage protein7e-93340
NC_014500:443874:458532458532459413882Dickeya dadantii 3937 chromosome, complete genomeputative DNA-binding prophage protein6e-93340
NC_003143:1233128:123851212385121239408897Yersinia pestis CO92, complete genomeputative DNA-binding prophage protein5e-93340
NC_004088:3382148:339541733954173396313897Yersinia pestis KIM, complete genomehypothetical protein5e-93340
NC_005810:1130251:114352111435211144417897Yersinia pestis biovar Microtus str. 91001, complete genomeputative DNA-binding prophage protein5e-93340
NC_017265:1136000:113984211398421140738897Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative DNA-binding prophage protein5e-93340
NC_012880:4117376:412064241206424121523882Dickeya dadantii Ech703, complete genomeputative DNA-binding prophage protein1e-92339
NC_012912:4194821:419839941983994199280882Dickeya zeae Ech1591, complete genomehypothetical protein2e-92339
NC_010468:1816359:184232618423261843210885Escherichia coli ATCC 8739, complete genomehypothetical protein2e-92338
NC_013716:2139952:217095321709532171840888Citrobacter rodentium ICC168, complete genomeputative DNA binding protein3e-91335
NC_003198:4513900:453839045383904539172783Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-81301
NC_012962:3864000:387468938746893875579891Photorhabdus asymbiotica, complete genomeDNA-binding prophage protein4e-79295
NC_009648:4497749:450509445050944505948855Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein9e-79293
NC_016845:4498097:450973145097314510624894Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,DNA-binding prophage protein5e-78291
NC_010102:4557037:456536345653634566253891Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-77288
NC_004547:639726:649514649514650404891Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-75283
NC_013421:701005:726654726654727541888Pectobacterium wasabiae WPP163, complete genomehypothetical protein9e-75280
NC_014304:77715:826108261083503894Erwinia billingiae Eb661 plasmid pEB102, complete sequenceintegrase1e-73276
NC_015566:345084:366768366768367655888Serratia sp. AS12 chromosome, complete genomehypothetical protein3e-73275
NC_015567:346500:366954366954367841888Serratia sp. AS9 chromosome, complete genomehypothetical protein3e-73275
NC_009832:426993:438505438505439392888Serratia proteamaculans 568, complete genomehypothetical protein5e-73274
NC_014121:489500:505868505868506752885Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative DNA-binding prophage protein1e-72273
NC_012214:537000:548805548805549689885Erwinia pyrifoliae Ep1/96, complete genomeintegrase3e-72271
NC_010554:2789722:280388628038862804794909Proteus mirabilis HI4320, complete genomehypothetical protein2e-71269
NC_009832:4482500:450178445017844502683900Serratia proteamaculans 568, complete genomehypothetical protein3e-71268
NC_012214:3303955:330950333095033310387885Erwinia pyrifoliae Ep1/96, complete genomeputative DNA-binding prophage protein1e-70266
NC_014029:331919:3861313861313871591029Yersinia pestis Z176003 chromosome, complete genomeDNA-binding prophage protein6e-70264
NC_009832:4564752:458247045824704583357888Serratia proteamaculans 568, complete genomehypothetical protein5e-68257
NC_014228:3282500:331576033157603316413654Xenorhabdus nematophila ATCC 19061, complete genomePutative DNA-binding prophage protein1e-66253
NC_012125:4536383:454625745462574547177921Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-64246
NC_016832:4425330:443515844351584436078921Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-64246
NC_003198:4453457:446328544632854464205921Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-64246
NC_014228:3442159:346680934668093467723915Xenorhabdus nematophila ATCC 19061, complete genomeputative integrase7e-62237
NC_010067:4418000:443536744353674436062696Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-60232
NC_013892:1457500:145757914575791458496918Xenorhabdus bovienii SS-2004 chromosome, complete genomeintegrase8e-58224
NC_012779:346998:363213363213363767555Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-43174
NC_011745:3443371:346552334655233466230708Escherichia coli ED1a chromosome, complete genomehypothetical protein8e-38157
NC_010067:3204682:320879332087933209152360Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-35149
NC_016831:947281:953938953938954636699Salmonella enterica subsp. enterica serovar Gallinarum/pullorumPutative DNA-binding protein9e-34144
NC_011274:2044000:207995120799512080649699Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91DNA-binding protein9e-34144
NC_011294:2053991:208881820888182089516699Salmonella enterica subsp. enterica serovar Enteritidis strDNA-binding protein2e-33143
NC_008390:987052:999170999170999670501Burkholderia cepacia AMMD chromosome 1, complete sequencehypothetical protein7e-28124
NC_010067:3204682:320912132091213209705585Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-27122
NC_014539:888562:9018529018529029491098Burkholderia sp. CCGE1003 chromosome 1, complete sequencehypothetical protein3e-24112
NC_010102:997417:100171510017151002263549Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-21102
NC_011205:2180598:221599322159932216529537Salmonella enterica subsp. enterica serovar Dublin str. CT_020218538e-1890.9
NC_011745:3443371:346525134652513465523273Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-1685.9
NC_007484:667879:674774674774675640867Nitrosococcus oceani ATCC 19707, complete genomeputative integrase5e-0858.5
NC_009434:3434381:345266034526603453523864Pseudomonas stutzeri A1501, complete genomeintegrase5e-0755.1
NC_007644:362000:365955365955366911957Moorella thermoacetica ATCC 39073, complete genomePhage integrase2e-0653.1
NC_011149:309556:314876314876315145270Salmonella enterica subsp. enterica serovar Agona str. SL483,DNA-binding prophage protein3e-0652.8
NC_010102:997417:100228210022821002413132Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-0651.6
NC_014228:3353896:337141033714103371604195Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein9e-0651.2