Pre_GI: BLASTP Hits

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Query: NC_016810:2871689:2905815 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 2905815, End: 2906030, Length: 216

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2896651:290455729045572904772216Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein9e-35145
NC_016863:2844883:285172828517282851943216Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein9e-35145
NC_016860:2896254:290681629068162907031216Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein9e-35145
NC_016857:2871689:290581529058152906030216Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein9e-35145
NC_016856:2896630:290347529034752903690216Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein9e-35145
NC_003197:2870268:288325028832502883465216Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein9e-35145
NC_011083:2847318:285775728577572857972216Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein9e-35145
NC_009648:3224495:323876732387673238982216Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein5e-33139
NC_011601:2854178:286395928639592864558600Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein2e-0754.7