Pre_GI: BLASTP Hits

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Query: NC_016810:2871689:2891273 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 2891273, End: 2892970, Length: 1698

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016857:2871689:2891273289127328929701698Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein0990
NC_016791:3953972:3955792395579239575161725Clostridium sp. BNL1100 chromosome, complete genomehypothetical protein6e-27122
NC_014803:709000:7202507202507219441695Pseudoalteromonas sp. SM9913 chromosome chromosome I, completehypothetical protein1e-25118
NC_010682:1652636:1664199166419916659261728Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein3e-25117
UCMB5137:3601629:3615149361514936168731725Bacillus atrophaeus UCMB-5137unknown7e-25115
NC_010571:5650806:5658391565839156601031713Opitutus terrae PB90-1, complete genomehypothetical protein4e-24113
NC_009975:56632:5663256632583621731Methanococcus maripaludis C6, complete genomeconserved hypothetical protein7e-23109
NC_007333:810381:8371988371988389341737Thermobifida fusca YX, complete genomehypothetical protein2e-0654.3