Pre_GI: BLASTP Hits

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Query: NC_016810:2871689:2886920 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 2886920, End: 2887495, Length: 576

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016857:2871689:288686328868632887495633Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage repressor protein cI9e-107385
NC_013282:3389619:340505834050583405672615Cronobacter turicensis, complete genomePutative uncharacterized protein ORFI in retron EC671e-69262
NC_016860:2896254:289974528997452900377633Salmonella enterica subsp. enterica serovar Typhimurium strphage repressor protein cI2e-60231
NC_011147:2676972:268936826893682690000633Salmonella enterica subsp. enterica serovar Paratyphi A strphage repressor protein cI2e-60231
NC_003198:4453457:450560945056094506241633Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage repressor protein cI2e-60231
NC_003197:2870268:287617928761792876811633Salmonella typhimurium LT2, complete genomehypothetical protein2e-60231
NC_006511:2677964:269383226938322694464633Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage repressor protein cI2e-60231
NC_011742:2823000:282933728293372829969633Escherichia coli S88 chromosome, complete genomephage regulatory protein cI3e-53207
NC_012947:2898179:290790729079072908476570Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeCI repressor9e-39159
NC_007613:761234:763483763483764052570Shigella boydii Sb227, complete genomerepressor protein2e-37155
NC_009436:1466580:147758714775871478183597Enterobacter sp. 638, complete genomebacteriophage CI repressor3e-37154
NC_020260:312805:318993318993319607615Cronobacter sakazakii Sp291, complete genomehypothetical protein6e-35146
NC_011601:846358:856102856102856671570Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein6e-34143
NC_014500:894136:9188619188619200541194Dickeya dadantii 3937 chromosome, complete genomeRepressor protein CI1e-32139
NC_013592:804288:821538821538822101564Dickeya dadantii Ech586, complete genomeCI repressor2e-32138
NC_014837:3766426:378197237819723782577606Pantoea sp. At-9b chromosome, complete genomeCI repressor9e-32136
NC_011601:846358:855128855128856051924Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein8e-31133
NC_011205:2938356:295459429545942954998405Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage repressor protein cI2e-28125
NC_015061:2770856:277962827796282780188561Rahnella sp. Y9602 chromosome, complete genomeCI repressor3e-27121
NC_014306:1244721:124907312490731249669597Erwinia billingiae Eb661, complete genomeBacteriophage CI repressor7e-27120
NC_020181:5182568:519547351954735196063591Enterobacter aerogenes EA1509E, complete genomeCI1e-26119
NC_012917:3565268:357597535759753576832858Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeCI repressor7e-25113
NC_009436:3807420:381287738128773813464588Enterobacter sp. 638, complete genomebacteriophage CI repressor4e-24110
NC_016845:4046142:405102140510214051617597Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,CI repressor8e-24110
NC_009648:3803622:383337538333753833950576Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage repressor protein CI2e-23108
NC_015061:596247:611561611561612151591Rahnella sp. Y9602 chromosome, complete genomeCI repressor8e-22103
NC_006155:2116834:212296221229622123573612Yersinia pseudotuberculosis IP 32953, complete genomeCI repressor of phage 186 and others2e-1995.5
NC_014837:2458780:246975224697522470630879Pantoea sp. At-9b chromosome, complete genomeCI repressor3e-1994.7
NC_010694:614985:629291629291629869579Erwinia tasmaniensis, complete genomeBacteriophage 186 repressor protein CI6e-1890.5
NC_020211:4598217:461422846142284614686459Serratia marcescens WW4, complete genomephage transcriptional regulator4e-1581.3
NC_009784:253852:266342266342266968627Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein4e-1374.3
NC_012912:1701231:174072917407291741118390Dickeya zeae Ech1591, complete genome9e-1063.5
NC_012125:894955:920537920537920893357Salmonella enterica subsp. enterica serovar Paratyphi C strainrepressor protein4e-0857.8
NC_013956:3525711:354353435435343543806273Pantoea ananatis LMG 20103 chromosome, complete genomeCI1e-0653.1
NC_011080:2870428:287668328766832876970288Salmonella enterica subsp. enterica serovar Newport str. SL254,repressor protein4e-0650.8