Pre_GI: BLASTP Hits

Some Help

Query: NC_016810:2871689:2884485 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 2884485, End: 2884712, Length: 228

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2676972:268742626874262687653228Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-22104
NC_003198:4453457:450366745036674503894228Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-22104
NC_006511:2677964:269189026918902692117228Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-22104
NC_009436:1466580:147985914798591480086228Enterobacter sp. 638, complete genomeTraR/DksA family transcriptional regulator3e-22103
NC_011149:2802199:281653628165362816763228Salmonella enterica subsp. enterica serovar Agona str. SL483,C4-type zinc finger protein, DksA/TraR family3e-22103
NC_003197:2870268:287354228735422873769228Salmonella typhimurium LT2, complete genomehypothetical protein3e-22103
NC_011205:2938356:295172829517282951955228Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DksA/TraR family protein3e-22103
NC_016860:2896254:289710828971082897335228Salmonella enterica subsp. enterica serovar Typhimurium strC4-type zinc finger protein, DksA/TraR family3e-22103
NC_020260:312805:321303321303321530228Cronobacter sakazakii Sp291, complete genomehypothetical protein6e-22102
NC_011601:846358:858374858374858601228Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeTraR/DksA family transcriptional regulator9e-22102
NC_013282:3389619:340304934030493403273225Cronobacter turicensis, complete genomeUncharacterized 8.5 kDa protein in gpA 5'region4e-2199.8
NC_011742:2823000:282714028271402827367228Escherichia coli S88 chromosome, complete genomeDksA/TraR protein family with a zinc finger8e-2199
NC_014837:3766426:378008137800813780308228Pantoea sp. At-9b chromosome, complete genomeTraR/DksA family transcriptional regulator4e-1993.2
NC_013956:3525711:354118635411863541413228Pantoea ananatis LMG 20103 chromosome, complete genomeCP801e-1891.7
NC_016845:4046142:405365340536534053880228Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-1891.3
NC_009436:3807420:381093238109323811153222Enterobacter sp. 638, complete genomeTraR/DksA family transcriptional regulator5e-1786.3
NC_009648:3803622:383141638314163831637222Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage protein2e-1684
NC_020181:5182568:519321951932195193440222Enterobacter aerogenes EA1509E, complete genomeHypothetical Zinc-finger containing protein4e-1683.2
NC_017047:4037674:404784940478494048073225Rahnella aquatilis HX2 chromosome, complete genomephage/conjugal plasmid C-4 type zinc finger protein, TraR family6e-1476.3
NC_015061:596247:614243614243614467225Rahnella sp. Y9602 chromosome, complete genomephage/conjugal plasmid C-4 type zinc finger protein, TraR family2e-1374.3
NC_014306:1244721:125134012513401251567228Erwinia billingiae Eb661, complete genomehypothetical protein4e-1373.6
NC_012917:3565268:357993435799343580158225Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, TraR/DksA family4e-1270.1
NC_014837:2458780:247245224724522472676225Pantoea sp. At-9b chromosome, complete genomeTraR/DksA family transcriptional regulator1e-1168.6
NC_010694:614985:631610631610631906297Erwinia tasmaniensis, complete genomehypothetical protein2e-1167.8
NC_008800:1870596:188442018844201884644225Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-1167.8
NC_020418:3022891:303850130385013038722222Morganella morganii subsp. morganii KT, complete genomehypothetical protein3e-1167.4
NC_017047:1551836:155901615590161559234219Rahnella aquatilis HX2 chromosome, complete genomephage/conjugal plasmid C-4 type zinc finger protein, TraR family3e-0960.5
NC_016818:1605918:161306616130661613284219Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completephage/conjugal plasmid C-4 type zinc finger protein, TraR family3e-0960.5
NC_015061:1598920:160610016061001606318219Rahnella sp. Y9602 chromosome, complete genomephage/conjugal plasmid C-4 type zinc finger protein, TraR family3e-0960.5
NC_012967:2105251:211903021190302119254225Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein7e-0959.3
NC_014306:103545:110121110121110348228Erwinia billingiae Eb661, complete genomehypothetical protein6e-0959.3
NC_009801:995396:100381510038151004039225Escherichia coli E24377A, complete genomeC4-type zinc finger protein, DksA/TraR family9e-0958.9
NC_013008:2824511:283498628349862835210225Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein7e-0855.8
NC_011353:2825500:283600628360062836230225Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeC4-type zinc finger protein, DksA/TraR family7e-0855.8
NC_016845:1285435:128975112897511289966216Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,phage/conjugal plasmid C-4 type zinc finger protein, TraR family2e-0754.3
NC_014972:2798670:280306728030672803276210Desulfobulbus propionicus DSM 2032 chromosome, complete genomephage/conjugal plasmid C-4 type zinc finger protein, TraR family3e-0753.9
NC_021066:2226826:224913522491352249353219Raoultella ornithinolytica B6, complete genomephage/conjugal plasmid C-4 type zinc finger protein, TraR family2e-0651.2
NC_016818:1795576:183433418343341834543210Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completephage/conjugal plasmid C-4 type zinc finger protein, TraR family3e-0650.4
NC_004578:3849835:385660138566013856828228Pseudomonas syringae pv. tomato str. DC3000, complete genomeC4-type zinc finger protein, DksA/TraR family6e-0649.7
NC_020211:4598217:461214846121484612372225Serratia marcescens WW4, complete genometranscriptional regulator, TraR/DksA family8e-0649.3