Pre_GI: BLASTP Hits

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Query: NC_016810:2325190:2341136 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 2341136, End: 2341339, Length: 204

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:2297837:230037223003722300827456Salmonella enterica subsp. enterica serovar Typhi str. CT18,bacteriophage tail fiber assembly protein (pseudogene)4e-32136
NC_004631:685357:703886703886704341456Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-32136
NC_016863:2324293:234316523431652343368204Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative phage tail fiber protein6e-32135
NC_016857:2325190:234113623411362341339204Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74bacteriophage tail fiber assembly protein6e-32135
NC_016856:2379027:239497323949732395176204Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative phage tail fiber protein6e-32135
NC_003197:2327474:234342023434202343623204Salmonella typhimurium LT2, complete genomeputative phage tail fiber protein6e-32135
NC_010102:683444:702186702186702389204Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-32135
NC_011205:2462025:246456024645602464829270Salmonella enterica subsp. enterica serovar Dublin str. CT_020218535e-25113