Pre_GI: BLASTP Hits

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Query: NC_016810:2027311:2044503 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 2044503, End: 2045024, Length: 522

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2026672:204386420438642044385522Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein9e-96348
NC_011294:2009388:2023221202322120243001080Salmonella enterica subsp. enterica serovar Enteritidis strphage protein2e-95347
NC_011205:2137696:2151528215152821526071080Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail protein2e-95347
NC_011094:2115750:2130186213018621312651080Salmonella enterica subsp. enterica serovar Schwarzengrund strtail protein3e-95347
NC_010102:1779707:1802789180278918038681080Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-95347
NC_016863:2029340:204653220465322047053522Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein9e-95345
NC_007712:1182518:1195147119514711962171071Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-55214
NC_009436:2776410:2790564279056427916221059Enterobacter sp. 638, complete genomebaseplate J family protein6e-53206
NC_008258:269806:2718452718452729031059Shigella flexneri 5 str. 8401, complete genomehypothetical protein7e-53206
NC_011750:2928990:2940628294062829416861059Escherichia coli IAI39 chromosome, complete genomeputative baseplate J-like phage protein1e-52205
NC_011742:2823000:2841141284114128421991059Escherichia coli S88 chromosome, complete genomebaseplate J-like phage protein2e-52204
NC_007946:2894793:2908804290880429098621059Escherichia coli UTI89, complete genomebacteriophage V tail protein2e-52204
NC_008563:2909945:2923831292383129248891059Escherichia coli APEC O1, complete genomebacteriophage V tail protein2e-52204
NC_011740:621408:6234476234476245051059Escherichia fergusonii ATCC 35469, complete genomeputative baseplate J-like phage protein7e-52202
AC_000091:1191353:120783712078371208499663Escherichia coli W3110 DNA, complete genomehypothetical protein2e-51201
NC_000913:1188999:120548312054831206145663Escherichia coli K12, complete genomee14 prophage; conserved protein2e-51201
NC_002937:2933000:2951774295177429528351062Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative2e-27121
NC_002937:255790:2580502580502591111062Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative2e-27121
NC_012660:4558122:458160345816034582274672Pseudomonas fluorescens SBW25 chromosome, complete genome8e-22102
NC_002947:4362271:4384490438449043855331044Pseudomonas putida KT2440, complete genomephage FluMu protein gp472e-1995.1
NC_015733:1398083:1398968139896813999991032Pseudomonas putida S16 chromosome, complete genomephage FluMu protein gp479e-1992.8
NC_000907:1568867:1589241158924115903081068Haemophilus influenzae Rd KW20, complete genomehypothetical protein2e-1892
NC_014228:3282500:3311254331125433123271074Xenorhabdus nematophila ATCC 19061, complete genomeputative bacteriophage protein1e-1789.4
NC_012751:899394:912848912848913759912Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage baseplate J-like protein2e-1168.6
NC_002927:3827211:3837547383754738386171071Bordetella bronchiseptica RB50, complete genomeputative phage tail protein2e-1065.5
NC_009800:2049346:2070534207053420716821149Escherichia coli HS, complete genomeputative baseplate J protein1e-0962.8
NC_012559:1888000:189030918903091891148840Laribacter hongkongensis HLHK9, complete genomeProbable phage FluMu protein gp471e-0858.9