Pre_GI: BLASTP Hits

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Query: NC_016810:2027311:2040072 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 2040072, End: 2040263, Length: 192

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2029340:204209820420982042319222Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein4e-29126
NC_016856:2085283:209390620939062094127222Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein4e-29126
NC_011294:2009388:201878720187872019008222Salmonella enterica subsp. enterica serovar Enteritidis strphage encoded DNA-binding protein4e-29126
NC_011205:2137696:214709421470942147315222Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-29126
NC_002655:301940:306856306856307446591Escherichia coli O157:H7 EDL933, complete genomeDNA invertase from prophage CP-933H5e-1476.6
NC_013008:306953:310772310772311326555Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA invertase from prophage CP-933H5e-1476.3
NC_011353:305820:310772310772311326555Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA-invertase5e-1476.3
NC_002695:301939:306891306891307445555Escherichia coli O157:H7 str. Sakai, complete genomeDNA-invertase5e-1476.3
AC_000091:1191353:121126212112621211816555Escherichia coli W3110 DNA, complete genomesite-specific DNA recombinase2e-1374.7
NC_000913:1188999:120890812089081209462555Escherichia coli K12, complete genomee14 prophage; site-specific DNA recombinase2e-1374.7
NC_003198:1867456:188867418886741888886213Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-1372.8
NC_011294:1220526:125397912539791254122144Salmonella enterica subsp. enterica serovar Enteritidis str1e-1168.6
NC_016810:1903426:191923119192311919377147Salmonella enterica subsp. enterica serovar Typhimurium str1e-1168.6
NC_011274:1299475:131816713181671318313147Salmonella enterica subsp. enterica serovar Gallinarum str. 287/911e-1168.6
NC_012880:3529017:354256735425673543136570Dickeya dadantii Ech703, complete genomeResolvase domain protein1e-1168.2
NC_020063:2531643:254405725440572544623567Enterobacteriaceae bacterium strain FGI 57, complete genomesite-specific recombinase, DNA invertase Pin4e-1167
NC_003198:4453457:448136944813694481590222Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-0858.5
NC_016863:1905454:192125919212591921384126Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-0755.1