Pre_GI: BLASTP Hits

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Query: NC_016810:1428201:1443909 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 1443909, End: 1444325, Length: 417

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1429516:144522414452241445640417Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein2e-75280
NC_003198:1621347:163925716392571639673417Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island effector protein3e-75280
NC_004631:1325817:134146313414631341879417Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island effector protein3e-75280
NC_006511:1506915:152482515248251525241417Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island effector protein3e-75280
NC_011147:1502096:152000615200061520422417Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island effector protein3e-75280
NC_011080:1470794:148649714864971486913417Salmonella enterica subsp. enterica serovar Newport str. SL254,secreted effector protein2e-75280
NC_006905:1509093:152474515247451525161417Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system effector SseE2e-75280
NC_011083:1476894:149257214925721492988417Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secreted effector protein2e-75280
NC_003197:1471349:148705714870571487473417Salmonella typhimurium LT2, complete genomesecreted effector protein2e-75280
NC_011094:1435347:145096214509621451378417Salmonella enterica subsp. enterica serovar Schwarzengrund strpathogenicity island 2 effector protein SseE2e-75280
NC_011274:1763676:178158617815861782002417Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island effector protein2e-75280
NC_011294:1723852:174176217417621742178417Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island effector protein2e-75280
NC_012125:2360815:237872523787252379141417Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island effector protein2e-75280
NC_016856:1481325:149703314970331497449417Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein2e-75280
NC_016857:1428201:144390914439091444325417Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secreted effector protein2e-75280
NC_016860:1469066:148474414847441485160417Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island effector protein2e-75280
NC_010102:1616530:163444016344401634853414Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-75278
NC_010067:1507823:152933115293311529747417Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-66248
NC_017046:1428272:144424114442411444396156Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island protein2e-22104
NC_016831:1236786:125269112526911252846156Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island effector protein2e-22104
NC_011205:1852665:187057518705751870730156Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secreted effector protein2e-22104
NC_016832:1324820:134069713406971340852156Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secreted effector protein4e-22103
NC_011149:1710601:172851117285111728666156Salmonella enterica subsp. enterica serovar Agona str. SL483,secreted effector protein4e-22103
NC_005085:2774370:277893427789342779362429Chromobacterium violaceum ATCC 12472, complete genomesecretion system effector SseE2e-0857.4