Pre_GI: BLASTP Hits

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Query: NC_016776:3181706:3197919 Bacteroides fragilis 638R, complete genome

Start: 3197919, End: 3198968, Length: 1050

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006347:3082921:3099134309913431001831050Bacteroides fragilis YCH46, complete genomeribonucleotide-diphosphate reductase beta subunit0706
NC_003228:3143470:3160425316042531614741050Bacteroides fragilis NCTC 9343, complete genomeribonucleotide-diphosphate reductase beta subunit0705
NC_016077:2044876:2062760206276020637881029Acidaminococcus intestini RyC-MR95 chromosome, complete genomeribonucleoside-diphosphate reductase1e-95350
NC_017161:1:2645326453274811029Hydrogenobacter thermophilus TK-6 chromosome, complete genomeribonucleotide reductase9e-82303
NC_013799:1:2639226392274201029Hydrogenobacter thermophilus TK-6, complete genomeribonucleotide reductase beta subunit9e-82303
NC_006177:324363:3582153582153592551041Symbiobacterium thermophilum IAM 14863, complete genomeribonucleoside-diphosphate reductase beta subunit6e-81301
NC_009663:2478311:2492929249292924939481020Sulfurovum sp. NBC37-1, complete genomeribonucleotide-diphosphate reductase subunit beta1e-72273
NC_017187:10320:2853728537295561020Arcobacter butzleri ED-1, complete genomeribonucleotide-diphosphate reductase subunit beta2e-65249
NC_009850:11076:2920929209302281020Arcobacter butzleri RM4018, complete genomeribonucleoside-diphosphate reductase, beta chain2e-64246
NC_014829:4511738:4520330452033045213671038Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeribonucleotide reductase6e-64244
NC_008599:29000:3000730007310291023Campylobacter fetus subsp. fetus 82-40, complete genomeribonucleoside-diphosphate reductase, beta subunit7e-63241
NC_009715:1923676:1939527193952719405491023Campylobacter curvus 525.92 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta4e-60232
NC_010547:98330:1137121137121147551044Cyanothece sp. ATCC 51142 chromosome linear, complete sequenceribonucleoside-diphosphate reductase beta subunit3e-59229
NC_009802:1917917:1934770193477019357921023Campylobacter concisus 13826, complete genomeribonucleoside-diphosphate reductase, beta subunit3e-59229
NC_013406:781308:7823497823497833801032Paenibacillus sp. Y412MC10 chromosome, complete genomeRibonucleoside-diphosphate reductase6e-52204
NC_019902:2372097:2388412238841223896501239Thioalkalivibrio nitratireducens DSM 14787, complete genomeRibonucleotide reductase of class Ia (aerobic), beta subunit1e-31137
NC_010645:3239420:3246135324613532473191185Bordetella avium 197N, complete genomeribonucleotide-diphosphate reductase subunit beta2e-31136
NC_015850:2147682:2163921216392121649491029Acidithiobacillus caldus SM-1 chromosome, complete genomeribonucleoside-diphosphate reductase subunit beta8e-30131
NC_011901:2739984:2754202275420227554281227Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeribonucleotide-diphosphate reductase subunit beta1e-28127
NC_005085:2457295:2469359246935924704411083Chromobacterium violaceum ATCC 12472, complete genomeribonucleotide-diphosphate reductase beta subunit1e-28127
NC_007404:2048000:2064524206452420656541131Thiobacillus denitrificans ATCC 25259, complete genomeribonucleotide-diphosphate reductase beta subunit1e-28127
NC_013959:2666321:2671821267182126729691149Sideroxydans lithotrophicus ES-1 chromosome, complete genomeRibonucleoside-diphosphate reductase3e-28126
NC_013889:1514799:1531185153118515324231239Thioalkalivibrio sp. K90mix chromosome, complete genomeRibonucleoside-diphosphate reductase4e-28125
NC_015942:2544407:2551097255109725522211125Acidithiobacillus ferrivorans SS3 chromosome, complete genomeribonucleotide reductase1e-27124
NC_015726:3280000:3299479329947933006631185Cupriavidus necator N-1 chromosome 1, complete sequenceribonucleoside-diphosphate reductase subunit beta1e-27124
NC_007347:3204637:3222450322245032236341185Ralstonia eutropha JMP134 chromosome 1, complete sequenceribonucleotide-diphosphate reductase beta subunit1e-27124
NC_016002:1975000:2016212201621220172941083Pseudogulbenkiania sp. NH8B, complete genomeribonucleoside-diphosphate reductase subunit beta7e-28124
NC_005773:4282840:4295151429515142963981248Pseudomonas syringae pv. phaseolicola 1448A, complete genomeribonucleoside-diphosphate reductase, beta subunit2e-27123
NC_011206:2239109:2241986224198622431101125Acidithiobacillus ferrooxidans ATCC 53993, complete genomeRibonucleoside-diphosphate reductase2e-27123
NC_011761:2344408:2347267234726723484091143Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeribonucleotide-diphosphate reductase subunit beta2e-27123
NC_012660:5242392:5250425525042552516751251Pseudomonas fluorescens SBW25 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta6e-27121
NC_015556:1899850:1908749190874919100051257Pseudomonas fulva 12-X chromosome, complete genomeRibonucleoside-diphosphate reductase2e-26120
NC_015953:4908069:4932963493296349339851023Streptomyces sp. SirexAA-E chromosome, complete genomeribonucleoside-diphosphate reductase5e-26119
NC_009434:1743696:1752789175278917540361248Pseudomonas stutzeri A1501, complete genomeribonucleotide-diphosphate reductase subunit beta1e-25117
NC_015740:1594376:1604475160447516057221248Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeribonucleotide-diphosphate reductase subunit beta1e-25117
NC_007925:3911323:3910166391016639113261161Rhodopseudomonas palustris BisB18, complete genomeRibonucleoside-diphosphate reductase3e-25116
NC_014831:2397563:2410458241045824114681011Thermaerobacter marianensis DSM 12885 chromosome, complete genomeRibonucleoside-diphosphate reductase3e-25116
NC_009439:3485000:3492649349264934938991251Pseudomonas mendocina ymp, complete genomeribonucleotide-diphosphate reductase subunit beta7e-25115
NC_011770:4591500:4597815459781545990621248Pseudomonas aeruginosa LESB58, complete genomeNrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase6e-25115
NC_008463:4389721:4397858439785843991051248Pseudomonas aeruginosa UCBPP-PA14, complete genomeribonucleoside reductase, small chain6e-25115
NC_002516:1236644:1249907124990712511541248Pseudomonas aeruginosa PAO1, complete genomeribonucleotide-diphosphate reductase beta subunit6e-25115
NC_018080:4280401:4288538428853842897851248Pseudomonas aeruginosa DK2 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta6e-25115
NC_015410:3791500:3798766379876638000161251Pseudomonas mendocina NK-01 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta8e-25114
NC_007912:4396972:4400656440065644017621107Saccharophagus degradans 2-40, complete genomeAmino acid adenylation7e-24111
NC_017506:3825148:3840962384096238420201059Marinobacter adhaerens HP15 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta2e-23110
NC_012985:815040:8150408150408160981059Candidatus Liberibacter asiaticus str. psy62, complete genomeribonucleotide-diphosphate reductase subunit beta2e-23110
NC_019892:1113114:111802411180241119022999Singulisphaera acidiphila DSM 18658 chromosome, complete genomeribonucleotide reductase subunit beta1e-21104
NC_008095:6323456:6333433633343363344821050Myxococcus xanthus DK 1622, complete genomeribonucleoside-diphosphate reductase, beta subunit2e-21103
NC_015711:8169752:8180406818040681814161011Myxococcus fulvus HW-1 chromosome, complete genomeribonucleoside-diphosphate reductase5e-21102
NC_015947:223184:2298562298562308751020Burkholderia sp. JV3 chromosome, complete genomeribonucleoside-diphosphate reductase1e-20100
NC_009655:1626466:1643027164302716441571131Actinobacillus succinogenes 130Z chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta3e-2099.8
NC_005061:524704:5309385309385320681131Candidatus Blochmannia floridanus, complete genomeribonucleotide-diphosphate reductase beta subunit1e-1894.4
NC_009901:2485965:2497455249745524985851131Shewanella pealeana ATCC 700345, complete genomeRibonucleoside-diphosphate reductase1e-1894.4
NC_014909:540000:5426525426525437821131Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeribonucleoside-diphosphate reductase 1 subunit beta2e-1893.6
NC_017190:2130651:215271521527152153632918Bacillus amyloliquefaciens LL3 chromosome, complete genomeribonucleoside-diphosphate reductase (minor subunit)2e-1893.2
NC_012026:415447:4374154374154384461032Anaplasma marginale str. Florida, complete genomeribonuceoside-diphosphate reductase beta chain (nrdB)4e-1892.8
NC_013716:2476334:2479843247984324809731131Citrobacter rodentium ICC168, complete genomeribonucleoside-diphosphate reductase 1 beta chain5e-1892
NC_020075:590481:5928265928265939561131Candidatus Blochmannia chromaiodes str. 640, complete genomeRibonucleoside-diphosphate reductase 1 subunit beta1e-1791.3
NC_012669:96966:105626105626106606981Beutenbergia cavernae DSM 12333, complete genomeRibonucleoside-diphosphate reductase1e-1790.9
NC_016893:694587:715325715325716302978Wigglesworthia glossinidia endosymbiont of Glossina morsitansferritin-like ribonucleoside-diphosphate reductase 2, beta subunit1e-1790.9
NC_012803:1117875:113229711322971133268972Micrococcus luteus NCTC 2665, complete genomeribonucleoside-diphosphate reductase class Ib beta subunit1e-1790.5
NC_016642:2440070:246763024676302468580951Pseudovibrio sp. FO-BEG1 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta2e-1790.1
NC_015588:2468207:248030924803092481289981Isoptericola variabilis 225 chromosome, complete genomeRibonucleoside-diphosphate reductase5e-1789
NC_008025:1889891:189193918919391892898960Deinococcus geothermalis DSM 11300, complete genomeRibonucleoside-diphosphate reductase6e-1788.6
NC_011886:2369980:237919323791932380167975Arthrobacter chlorophenolicus A6, complete genomeRibonucleoside-diphosphate reductase9e-1788.2
NC_015671:3211972:321960232196023220582981Cellvibrio gilvus ATCC 13127 chromosome, complete genomeribonucleoside-diphosphate reductase1e-1687.4
NC_017191:1173989:130493513049351305522588Bacillus amyloliquefaciens XH7 chromosome, complete genomeribonucleotide-diphosphate reductase subunit1e-1687.4
NC_017188:1172181:130335813033581303945588Bacillus amyloliquefaciens TA208 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta1e-1687.4
NC_015514:3911655:391981239198123920792981Cellulomonas fimi ATCC 484 chromosome, complete genomeribonucleoside-diphosphate reductase2e-1687
NC_009381:1783886:181825118182511819222972Yersinia pestis Pestoides F chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta5e-1685.5
NC_014550:2013422:202349620234962024470975Arthrobacter arilaitensis Re117, complete genomeribonucleoside-diphosphate reductase subunit beta7e-1685.1
NC_012225:445500:4480934480934491631071Brachyspira hyodysenteriae WA1, complete genomeribonucleoside-diphosphate reductase, beta subunit9e-1581.3
NC_014151:449732:480015480015480995981Cellulomonas flavigena DSM 20109 chromosome, complete genomeRibonucleoside-diphosphate reductase1e-1481.3
NC_007794:262402:2884022884022894571056Novosphingobium aromaticivorans DSM 12444, complete genomeRibonucleoside-diphosphate reductase1e-1480.9
NC_016932:1791868:180052018005201801506987Corynebacterium pseudotuberculosis 316 chromosome, complete genomeribonucleoside-diphosphate reductase subunit beta2e-1480.1
NC_018644:446102:453893453893454882990Alpha proteobacterium HIMB59 chromosome, complete genomeRibonucleotide reductase, small chain3e-1479.7
NC_004344:672550:693847693847694821975Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,ribonucleotide-diphosphate reductase beta subunit9e-1478.2
NC_015859:952500:975322975322976218897Corynebacterium variabile DSM 44702 chromosome, complete genomeribonucleoside-diphosphate reductase subunit beta9e-1478.2
NC_014150:3053859:3071688307168830727611074Brachyspira murdochii DSM 12563 chromosome, complete genomeribonucleotide reductase1e-1274.3
NC_015975:1593797:159447915944791595432954Lactobacillus ruminis ATCC 27782 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta5e-1168.9
NC_012590:2117027:213742821374282138414987Corynebacterium aurimucosum ATCC 700975, complete genomeribonucleoside-diphosphate reductase beta chain1e-1067.8
NC_009749:937412:9556039556039568351233Francisella tularensis subsp. holarctica FTA, complete genomeribonucleotide-diphosphate reductase beta subunit2e-0963.9
NC_008369:939356:9575449575449587761233Francisella tularensis subsp. holarctica OSU18, complete genomeribonucleoside-diphosphate reductase2e-0963.9
NC_007880:935670:9538559538559550871233Francisella tularensis subsp. holarctica, complete genomeBiofunctional protein, glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase, beta subunit2e-0963.9
NC_006570:529426:5532295532295544611233Francisella tularensis subsp. tularensis Schu 4, complete genomeribonucleotide-diphosphate reductase beta subunit1e-0963.9
NC_008245:529378:5531815531815544131233Francisella tularensis subsp. tularensis FSC 198, complete genomeBiofunctional protein, glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase, beta subunit1e-0963.9
NC_016937:529459:5532515532515544831233Francisella tularensis subsp. tularensis TI0902 chromosome,ribonucleotide reductase of class Ia (aerobic) beta subunit1e-0963.9
NC_013172:3141739:3155862315586231568871026Brachybacterium faecium DSM 4810, complete genomeribonucleoside-diphosphate reductase class Ib beta subunit6e-0962
NC_014550:3316115:3358652335865233596771026Arthrobacter arilaitensis Re117, complete genomeribonucleoside-diphosphate reductase subunit beta2e-0860.1
NC_011134:533679:5479105479105489231014Streptococcus equi subsp. zooepidemicus str. MGCS10565, completeribonucleotide reductase of class Ib (aerobic) beta subunit NrdF4e-0859.3
NC_012470:1635516:1644085164408516450981014Streptococcus equi subsp. zooepidemicus, complete genomeribonucleoside-diphosphate reductase beta subunit4e-0859.3
NC_013201:145973:1570631570631580731011Halomicrobium mukohataei DSM 12286 plasmid pHmuk01, completeribonucleotide reductase5e-0755.8
NC_015177:1476073:147849214784921479466975Pedobacter saltans DSM 12145 chromosome, complete genomeribonucleotide reductase4e-0652.8