Pre_GI: BLASTP Hits

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Query: NC_016768:1279178:1297462 Mycobacterium tuberculosis KZN 4207 chromosome, complete genome

Start: 1297462, End: 1297860, Length: 399

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012943:1279228:129751812975181297916399Mycobacterium tuberculosis KZN 1435 chromosome, complete genometransposase5e-72268
NC_016604:5228500:5230707523070752320321326Mycobacterium rhodesiae NBB3 chromosome, complete genometransposase family protein3e-33140
NC_015859:370500:380286380286380900615Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element3e-23107
NC_013441:27877:5032550325516351311Gordonia bronchialis DSM 43247, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein8e-22102
NC_016786:54000:582755827559099825Corynebacterium diphtheriae HC01 chromosome, complete genometransposase-like protein2e-2097.8
NC_016782:56500:582765827659100825Corynebacterium diphtheriae 241 chromosome, complete genometransposase-like protein2e-2097.8
NC_016906:1565868:157384815738481574399552Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative transposase5e-2096.3
NC_016906:3286384:3299158329915833004681311Gordonia polyisoprenivorans VH2 chromosome, complete genometransposase6e-2095.9
NC_014215:2259290:2275909227590922772161308Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Transposase4e-1993.6
NC_015859:1536439:156185915618591562278420Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element4e-1890.1
NC_015859:1589707:159221315922131593163951Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element1e-1788.6
NC_014215:349917:3530653530653541381074Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Transposase1e-1788.6
NC_014550:3377834:3397191339719133984921302Arthrobacter arilaitensis Re117, complete genometransposase of ISAar42, ISL3 family1e-1788.2
NC_015859:1099919:111995911199591120708750Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element2e-1787.4
NC_015859:952500:954838954838955587750Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element2e-1787.4
NC_014215:349917:3698853698853709581074Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Transposase4e-1786.7
NC_013169:1545890:1552991155299115543461356Kytococcus sedentarius DSM 20547, complete genometransposase family protein4e-1786.7
NC_013169:2351475:2366115236611523674311317Kytococcus sedentarius DSM 20547, complete genometransposase family protein5e-1786.3
NC_008596:5186042:5194184519418451955061323Mycobacterium smegmatis str. MC2 155, complete genomeIS1096, tnpA protein8e-1785.9
NC_008596:2873675:2890417289041728917391323Mycobacterium smegmatis str. MC2 155, complete genomeIS1096, tnpA protein8e-1785.9
NC_008596:1302000:1346869134686913481911323Mycobacterium smegmatis str. MC2 155, complete genomeIS1096, tnpA protein8e-1785.9
NC_008596:421882:4453044453044466261323Mycobacterium smegmatis str. MC2 155, complete genomeIS1096, tnpA protein8e-1785.9
NC_014550:889500:9098209098209111271308Arthrobacter arilaitensis Re117, complete genometransposase of ISAar20, ISL3 family7e-1785.9
NC_013169:2423863:2435335243533524366511317Kytococcus sedentarius DSM 20547, complete genometransposase family protein6e-1785.9
NC_019950:3139865:3143059314305931440961038Mycobacterium canettii CIPT 140060008 complete genomeTransposase (fragment)1e-1685.5
NC_006958:359760:378186378186378515330Corynebacterium glutamicum ATCC 13032, complete genomeTRANSPOSASE-fragment1e-1685.5
NC_014550:2562053:2568416256841625695191104Arthrobacter arilaitensis Re117, complete genome9e-1785.5
NC_012803:2195808:2199532219953222008391308Micrococcus luteus NCTC 2665, complete genometransposase1e-1685.1
NC_015848:3175692:3178384317838431794631080Mycobacterium canettii CIPT 140010059, complete genometnpa protein1e-1684.7
NC_014550:889500:8955988955988969051308Arthrobacter arilaitensis Re117, complete genometransposase of ISAar19, ISL3 family1e-1684.7
NC_014550:2091797:2098401209840120997081308Arthrobacter arilaitensis Re117, complete genometransposase of ISAar19, ISL3 family1e-1684.7
NC_014549:14000:1483514835161421308Arthrobacter arilaitensis Re117 plasmid pRE117-1, completetransposase of ISAar19, ISL3 family1e-1684.7
NC_014550:2562053:2575668257566825769751308Arthrobacter arilaitensis Re117, complete genometransposase of ISAar19, ISL3 family1e-1684.7
NC_014550:3316115:3353160335316033544671308Arthrobacter arilaitensis Re117, complete genometransposase of ISAar19, ISL3 family1e-1684.7
NC_014550:1581812:1624848162484816261551308Arthrobacter arilaitensis Re117, complete genometransposase of ISAar19, ISL3 family1e-1684.7
NC_014550:2562053:2570492257049225717991308Arthrobacter arilaitensis Re117, complete genometransposase of ISAar19, ISL3 family1e-1684.7
NC_014550:786692:7956117956117969181308Arthrobacter arilaitensis Re117, complete genometransposase of ISAar19, ISL3 family1e-1684.7
NC_014549:14000:2100221002223091308Arthrobacter arilaitensis Re117 plasmid pRE117-1, completetransposase of ISAar19, ISL3 family1e-1684.7
NC_014550:2562053:2567037256703725683441308Arthrobacter arilaitensis Re117, complete genometransposase of ISAar19, ISL3 family1e-1684.7
NC_019950:1689910:1697301169730116986201320Mycobacterium canettii CIPT 140060008 complete genomePutative transposase2e-1684.3
NC_015859:1069116:1076796107679610781391344Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element2e-1684.3
NC_015859:1536439:1554626155462615559691344Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element2e-1684.3
NC_015859:2726414:2729388272938827307191332Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element2e-1684.3
NC_014215:349917:3615203615203628451326Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,2e-1684
NC_013172:783097:7911297911297924391311Brachybacterium faecium DSM 4810, complete genometransposase family protein3e-1684
NC_014550:3377834:3390283339028333915931311Arthrobacter arilaitensis Re117, complete genometransposase of ISAar38, ISL3 family3e-1683.6
NC_013169:1759900:1771629177162917729361308Kytococcus sedentarius DSM 20547, complete genometransposase family protein4e-1683.6
NC_013169:2423863:2446250244625024475661317Kytococcus sedentarius DSM 20547, complete genometransposase family protein5e-1683.2
NC_014151:3663295:3683545368354536848611317Cellulomonas flavigena DSM 20109 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein7e-1682.4
NC_014550:3377834:339932033993203399937618Arthrobacter arilaitensis Re117, complete genome9e-1682.4
NC_021064:1211480:1215735121573512170421308Propionibacterium avidum 44067, complete genomeTransposase2e-1580.9
NC_021064:2001786:2008803200880320101101308Propionibacterium avidum 44067, complete genomeTransposase2e-1580.9
NC_021064:793098:7949607949607962671308Propionibacterium avidum 44067, complete genomeTransposase2e-1580.9
NC_021064:1211480:1226656122665612279631308Propionibacterium avidum 44067, complete genomeTransposase2e-1580.9
NC_021064:1705961:1720001172000117213081308Propionibacterium avidum 44067, complete genomeTransposase2e-1580.9
NC_021064:303635:3091033091033104101308Propionibacterium avidum 44067, complete genomeTransposase2e-1580.9
NC_013169:474856:4827244827244840311308Kytococcus sedentarius DSM 20547, complete genometransposase family protein8e-1579
NC_013169:612456:6341266341266354331308Kytococcus sedentarius DSM 20547, complete genometransposase family protein8e-1579
NC_013172:2877722:2891180289118028924901311Brachybacterium faecium DSM 4810, complete genometransposase family protein9e-1579
NC_014215:349917:373123373123373677555Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,2e-1477.4
NC_014215:142500:1466501466501479571308Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Transposase5e-1476.6
NC_014215:421683:4254814254814267881308Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Transposase5e-1476.6
NC_014215:2259290:2266080226608022673871308Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Transposase5e-1476.6
NC_014215:322362:3262243262243275311308Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Transposase5e-1476.6
NC_014215:349917:3748543748543761611308Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Transposase4e-1476.6
NC_009439:2038303:2057754205775420590551302Pseudomonas mendocina ymp, complete genometransposase, IS204/IS1001/IS1096/IS1165 family protein2e-1271.2
NC_009439:1297851:1316658131665813179591302Pseudomonas mendocina ymp, complete genometransposase, IS204/IS1001/IS1096/IS1165 family protein2e-1271.2
NC_009439:3770282:3785026378502637863271302Pseudomonas mendocina ymp, complete genometransposase, IS204/IS1001/IS1096/IS1165 family protein2e-1271.2
NC_009439:860571:8727358727358740361302Pseudomonas mendocina ymp, complete genometransposase, IS204/IS1001/IS1096/IS1165 family protein2e-1271.2
NC_009439:4913767:4925830492583049271311302Pseudomonas mendocina ymp, complete genometransposase, IS204/IS1001/IS1096/IS1165 family protein2e-1271.2
NC_009439:442890:4514324514324527331302Pseudomonas mendocina ymp, complete genometransposase, IS204/IS1001/IS1096/IS1165 family protein2e-1271.2
NC_009439:442890:4656794656794669801302Pseudomonas mendocina ymp, complete genometransposase, IS204/IS1001/IS1096/IS1165 family protein2e-1271.2
NC_009439:3394174:3404486340448634057871302Pseudomonas mendocina ymp, complete genometransposase, IS204/IS1001/IS1096/IS1165 family protein2e-1271.2
NC_017217:23000:5230952309534421134Bifidobacterium animalis subsp. lactis V9 chromosome, completetransposase, IS204/IS1001/IS1096/IS1165 family protein1e-1168.6
NC_012814:23000:5230952309534421134Bifidobacterium animalis subsp. lactis Bl-04, complete genometransposase, IS204/IS1001/IS1096/IS1165 family protein1e-1168.6
NC_012815:23000:5230952309534421134Bifidobacterium animalis subsp. lactis DSM 10140, complete genometransposase, IS204/IS1001/IS1096/IS1165 family protein1e-1168.6
NC_017216:22454:5217652176534711296Bifidobacterium animalis subsp. lactis BLC1, complete genometransposase, IS204-IS1001-IS1096-IS1165 family protein2e-1168.2
NC_011835:23204:5234052340536711332Bifidobacterium animalis subsp. lactis AD011 chromosome, completetransposase1e-1168.2
NC_017214:658821:6879576879576893001344Bifidobacterium animalis subsp. lactis BB-12 chromosome, completetransposase1e-1168.2
NC_017215:22616:5233852338536811344Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,transposase1e-1168.2
NC_013169:513327:5285295285295298931365Kytococcus sedentarius DSM 20547, complete genometransposase family protein2e-1064.3
NC_013169:2423863:2436721243672124380851365Kytococcus sedentarius DSM 20547, complete genometransposase family protein2e-1064.3
NC_014215:349917:362888362888363061174Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,9e-1062.4
NC_015588:2200517:2208319220831922095871269Isoptericola variabilis 225 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein1e-0962
NC_004369:256262:276148276148276333186Corynebacterium efficiens YS-314, complete genometransposase2e-0961.2
NC_015588:2037726:2057130205713020583831254Isoptericola variabilis 225 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein2e-0961.2
NC_015588:95697:1020761020761033291254Isoptericola variabilis 225 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein2e-0961.2
NC_015588:1213873:1221604122160412228601257Isoptericola variabilis 225 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein3e-0960.5
NC_021064:1789980:1794383179438317955761194Propionibacterium avidum 44067, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein1e-0858.9
NC_015671:2011462:2021903202190320230931191Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein9e-0958.9
NC_014215:349917:3592953592953604101116Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Transposase4e-0857
NC_014215:142500:148238148238148552315Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,5e-0856.6
NC_021064:31816:494524945250312861Propionibacterium avidum 44067, complete genometransposase6e-0856.2
NC_015588:2200517:2215347221534722166661320Isoptericola variabilis 225 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein6e-0856.2
NC_013235:5127148:5155740515574051570441305Nakamurella multipartita DSM 44233, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein2e-0754.3
NC_013235:1354443:1365872136587213671761305Nakamurella multipartita DSM 44233, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein2e-0754.3
NC_014836:1108919:1121794112179411230081215Desulfurispirillum indicum S5 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein4e-0753.5
NC_007759:1169547:1188588118858811897931206Syntrophus aciditrophicus SB, complete genometransposase1e-0652
NC_007759:512477:5211935211935223981206Syntrophus aciditrophicus SB, complete genometransposase1e-0652
NC_014844:2721746:2766699276669927679131215Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein2e-0650.8
NC_015859:3126500:313132331313233131469147Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element4e-0650.1