Pre_GI: BLASTP Hits

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Query: NC_016582:9664000:9673806 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 9673806, End: 9674723, Length: 918

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016582:9551123:955614895561489556957810Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein6e-81300
NC_003888:7337453:735751973575197358352834Streptomyces coelicolor A3(2), complete genomehypothetical protein7e-78290
NC_016114:907500:914418914418915302885Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehelix-turn-helix domain-containing protein5e-76284
NC_013929:7278414:728707572870757287953879Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein9e-76283
NC_003155:3913789:391378939137893914658870Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein1e-63243
NC_016111:2651500:266677826667782667587810Streptomyces cattleya NRRL 8057, complete genomehypothetical protein5e-55214
NC_016111:5515462:552035955203595521216858Streptomyces cattleya NRRL 8057, complete genomeDNA-binding protein3e-51202
NC_016111:4003290:401923940192394020021783Streptomyces cattleya NRRL 8057, complete genomeDNA-binding protein1e-48193
NC_003888:6853107:685990068599006860775876Streptomyces coelicolor A3(2), complete genomeDNA-binding protein1e-47190
NC_016111:1546505:156168615616861562519834Streptomyces cattleya NRRL 8057, complete genomeDNA-binding protein2e-47189
NC_016111:1484424:148786814878681488752885Streptomyces cattleya NRRL 8057, complete genomeDNA-binding protein3e-47189
NC_014210:2277971:228780622878062288609804Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family3e-33142
NC_016582:5769080:577505757750575775887831Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative DNA-binding protein5e-30131
NC_007333:1129826:114288611428861143740855Thermobifida fusca YX, complete genomehelix-turn-helix motif3e-29129
NC_009953:1034809:104109910410991041896798Salinispora arenicola CNS-205 chromosome, complete genomehelix-turn-helix domain-containing protein2e-28126
NC_014211:174694:181153181153181977825Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidtranscriptional regulator, XRE family2e-28126
NC_013510:517878:549610549610550413804Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family2e-28126
NC_014165:2888961:290308629030862903943858Thermobispora bispora DSM 43833 chromosome, complete genomehelix-turn-helix domain-containing protein5e-28125
NC_014666:8198554:822022582202258221091867Frankia sp. EuI1c chromosome, complete genomehelix-turn-helix domain protein5e-28125
NC_013510:5394432:542319154231915424000810Thermomonospora curvata DSM 43183, complete genomehypothetical protein6e-28124
NC_013510:1614000:161614016161401616946807Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family2e-26119
NC_013510:3117837:314071431407143141526813Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family1e-25117
NC_013510:5309143:531986853198685320725858Thermomonospora curvata DSM 43183, complete genomehelix-turn-helix domain protein7e-24111
NC_016113:1143580:115353911535391154375837Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceDNA-binding protein5e-24111
NC_013595:8338619:834680983468098347672864Streptosporangium roseum DSM 43021, complete genomehypothetical protein3e-23109
NC_016582:6509792:652268365226836523435753Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein6e-23108
NC_017093:8518961:852462485246248525514891Actinoplanes missouriensis 431, complete genomeputative DNA-binding protein8e-23107
NC_014210:618500:636013636013636870858Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,helix-turn-helix domain protein1e-22107
NC_003888:3111998:312209131220913122933843Streptomyces coelicolor A3(2), complete genomeregulatory protein1e-22107
NC_014666:1117000:113569311356931136553861Frankia sp. EuI1c chromosome, complete genomehelix-turn-helix domain protein1e-21104
NC_013929:7663631:766986276698627670857996Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein2e-21103
NC_019673:1275627:130579813057981306682885Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-21103
NC_014210:4188448:419437041943704195233864Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family1e-21103
NC_013510:2937530:294657529465752947384810Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family5e-21102
NC_010572:1872840:188568418856841886526843Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein7e-21101
NC_007777:461500:470552470552471442891Frankia sp. CcI3, complete genomeputative DNA-binding protein1e-20100
NC_008278:132000:141420141420142196777Frankia alni ACN14a, complete genomePutative DNA-binding protein2e-20100
NC_009953:1581088:159099015909901591757768Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein3e-2099
NC_013595:8603188:862421786242178625092876Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, XRE family4e-2099
NC_013510:3640776:365281536528153653633819Thermomonospora curvata DSM 43183, complete genomehelix-turn-helix domain protein5e-2098.6
NC_014210:1588426:160049716004971601357861Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family7e-2098.2
NC_018750:6950695:697001969700196970894876Streptomyces venezuelae ATCC 10712, complete genomeputative DNA-binding protein1e-1997.4
NC_021177:2309615:232354323235432324382840Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator, XRE family1e-1997.4
NC_007333:430000:437708437708438553846Thermobifida fusca YX, complete genomehelix-turn-helix motif1e-1997.4
NC_003155:6295078:630347763034776304325849Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein2e-1996.7
NC_015953:3313000:332751533275153328384870Streptomyces sp. SirexAA-E chromosome, complete genomeXRE family transcriptional regulator3e-1995.9
NC_013093:7174636:717771371777137178570858Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, XRE family6e-1995.1
NC_013510:4319296:433051643305164331355840Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family7e-1994.7
NC_013093:4247811:426232542623254263176852Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, XRE family9e-1994.4
NC_016582:6999074:701136370113637012175813Streptomyces bingchenggensis BCW-1 chromosome, complete genomeDNA-binding protein9e-1994.4
NC_016582:3763476:377266637726663773532867Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative DNA-binding protein2e-1893.2
NC_013595:8553904:856230685623068562959654Streptosporangium roseum DSM 43021, complete genomehypothetical protein4e-1892
NC_018681:2176000:218106721810672181957891Nocardia brasiliensis ATCC 700358 chromosome, complete genomeXRE family transcriptional regulator6e-1891.7
NC_013947:4695000:470870947087094709560852Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehelix-turn-helix domain-containing protein7e-1891.3
NC_015434:4640769:464580646458064646765960Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix domain-containing protein8e-1891.3
NC_015957:336500:343902343902344747846Streptomyces violaceusniger Tu 4113 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1790.9
NC_009380:725870:725870725870726763894Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1790.1
NC_014210:5309121:532623653262365327090855Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family2e-1790.1
NC_003155:5005913:500736750073675008239873Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein4e-1789
NC_016111:3577572:358466335846633585508846Streptomyces cattleya NRRL 8057, complete genomeregulatory protein5e-1788.6
NC_018750:6192970:620089562008956201815921Streptomyces venezuelae ATCC 10712, complete genomeregulatory protein2e-1687
NC_014210:5048502:506004750600475060913867Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family2e-1687
NC_008278:6885254:690729269072926908092801Frankia alni ACN14a, complete genomeputative DNA-binding protein2e-1686.3
NC_016109:2065326:207701520770152077842828Kitasatospora setae KM-6054, complete genomehypothetical protein4e-1685.5
NC_013159:1225866:123908512390851239939855Saccharomonospora viridis DSM 43017, complete genomepredicted transcription factor, MBF1 like protein5e-1685.1
NC_016887:511034:520181520181521056876Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA-binding protein7e-1684.7
NC_019673:2051363:206851720685172069416900Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1583.2
NC_003888:4927170:495958449595844960435852Streptomyces coelicolor A3(2), complete genomehypothetical protein3e-1582.4
NC_007333:1129826:114522311452231146071849Thermobifida fusca YX, complete genomehelix-turn-helix motif6e-1581.6
NC_016582:9459566:946873494687349469609876Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative chitinase-promoter-binding protein7e-1581.6
NC_016887:4403872:441600344160034416932930Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA binding protein1e-1480.9
NC_013929:6526745:653513365351336535969837Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein1e-1480.9
NC_007333:2093167:210360821036082104447840Thermobifida fusca YX, complete genomehelix-turn-helix motif4e-1479
NC_013929:6343000:635516563551656355971807Streptomyces scabiei 87.22 chromosome, complete genomeregulatory protein6e-1478.6
NC_013947:656140:666520666520667377858Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1377.4
NC_003155:5443230:546098954609895461831843Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein1e-1377
NC_016111:4613599:461942546194254620279855Streptomyces cattleya NRRL 8057, complete genomeDNA-binding protein2e-1376.6
NC_007333:1559321:156710515671051568004900Thermobifida fusca YX, complete genomeputative DNA-binding protein3e-1375.9
NC_016582:7946000:794648579464857946778294Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative DNA-binding protein4e-1375.9
NC_016887:5988878:599475759947575995653897Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA-binding protein4e-1375.9
NC_015953:3258000:326489932648993265825927Streptomyces sp. SirexAA-E chromosome, complete genomehelix-turn-helix domain-containing protein5e-1375.1
NC_013947:5546315:555883255588325559650819Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein6e-1375.1
NC_021177:2766910:277838827783882779236849Streptomyces fulvissimus DSM 40593, complete genomePutative DNA-binding protein8e-1374.7
NC_018524:2246225:227205122720512272884834Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehelix-turn-helix family protein1e-1274.3
NC_015434:3755560:376664437666443767525882Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1273.6
NC_007333:810381:818333818333818782450Thermobifida fusca YX, complete genomehypothetical protein2e-1273.2
NC_016582:4934854:494431449443144945195882Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-1273.2
NC_016887:55000:701527015270958807Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA-binding protein2e-1273.2
NC_009380:4184695:419105441910544191791738Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein7e-1271.2
NC_013510:5175649:518784851878485188720873Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family2e-1169.7
NC_010572:5445081:547300054730005473845846Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein2e-1169.7
NC_016582:4874500:489859048985904899270681Streptomyces bingchenggensis BCW-1 chromosome, complete genomeDNA-binding protein3e-1169.3
NC_013159:2913927:292398329239832924870888Saccharomonospora viridis DSM 43017, complete genomeHelix-turn-helix protein3e-1169.3
NC_003888:3111998:312441731244173125262846Streptomyces coelicolor A3(2), complete genomeregulatory protein4e-1168.9
NC_008278:6885254:690516169051616905994834Frankia alni ACN14a, complete genomePutative protein; Putative regulatory protein1e-1067.4
NC_009380:1491428:151443915144391515320882Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein1e-1067
NC_010572:82000:922639226393192930Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein2e-1066.6
NC_016582:10104458:101224921012249210123442951Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein7e-1065.1
NC_013510:465188:482165482165483013849Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family1e-0963.9
NC_014318:7821227:785290778529077853674768Amycolatopsis mediterranei U32 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0963.9
NC_017186:7841740:785295378529537853720768Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein1e-0963.9
NC_003888:6568000:657921365792136580073861Streptomyces coelicolor A3(2), complete genomeDNA-binding protein2e-0963.5
NC_010572:5445081:547374554737455474428684Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein2e-0963.2
NC_006361:498305:508199508199509092894Nocardia farcinica IFM 10152, complete genomeputative DNA-binding protein2e-0963.2
NC_013947:1537275:155630815563081557171864Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein2e-0963.2
NC_006361:1827991:183273018327301833656927Nocardia farcinica IFM 10152, complete genomeputative DNA-binding protein4e-0962.4
NC_016109:4455158:446682644668264467680855Kitasatospora setae KM-6054, complete genomeputative transcriptional regulator4e-0962.4
NC_021177:6127431:613261361326136133464852Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator3e-0962.4
NC_016887:1949927:196913919691391969894756Nocardia cyriacigeorgica GUH-2, complete genomeXRE family transcriptional regulator3e-0962.4
NC_015957:8845274:886036588603658861210846Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative DNA-binding protein6e-0962
NC_009380:581000:589581589581590393813Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix domain-containing protein6e-0961.6
NC_013929:3299736:334588333458833346713831Streptomyces scabiei 87.22 chromosome, complete genomeregulatory protein6e-0961.6
NC_014830:13179:256642566426587924Intrasporangium calvum DSM 43043 chromosome, complete genomehelix-turn-helix domain protein8e-0961.2
NC_006361:4098469:410594941059494106791843Nocardia farcinica IFM 10152, complete genomeputative DNA-binding protein2e-0860.1
NC_016582:9076686:908588090858809086767888Streptomyces bingchenggensis BCW-1 chromosome, complete genomeDNA-binding protein5e-0858.9
NC_016109:6640000:664741066474106648264855Kitasatospora setae KM-6054, complete genomeputative transcriptional regulator4e-0858.9
NC_013947:4363250:436661243666124367442831Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehelix-turn-helix domain-containing protein5e-0858.5
NC_010572:8493946:444144415283843Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein1e-0757.8
NC_010572:8493946:854064785406478541489843Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein1e-0757.8
NC_010572:1:444144415283843Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein1e-0757.8
NC_007777:2638580:264546226454622645857396Frankia sp. CcI3, complete genomeputative DNA-binding protein2e-0757
NC_018524:301992:314254314254315090837Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehelix-turn-helix family protein3e-0756.2
NC_014210:2747787:275679127567912757561771Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family7e-0755.1
NC_019673:2051363:2073195207319520744391245Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-0653.9
NC_009142:949510:967187967187968044858Saccharopolyspora erythraea NRRL 2338, complete genometranscriptional regulator, XRE family3e-0652.8
NC_013510:1637730:164894816489481649778831Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family5e-0652
NC_016887:1093609:110105311010531101895843Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA-binding protein6e-0652
NC_014210:1588426:159930915993091600181873Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,helix-turn-helix domain protein6e-0651.6
NC_013510:2288746:229930422993042300185882Thermomonospora curvata DSM 43183, complete genomehelix-turn-helix domain protein7e-0651.6
NC_003155:6295078:630173663017366302587852Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein7e-0651.6
NC_014391:4644500:465076246507624651649888Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehelix-turn-helix domain-containing protein9e-0651.2