Pre_GI: BLASTP Hits

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Query: NC_016582:9664000:9673627 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 9673627, End: 9673845, Length: 219

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016111:2651500:266653026665302666781252Streptomyces cattleya NRRL 8057, complete genomehypothetical protein5e-1166.6
NC_016111:4003290:402001840200184020269252Streptomyces cattleya NRRL 8057, complete genomehypothetical protein9e-1165.5
NC_016111:1484424:148874914887491489009261Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-1065.1
NC_016111:3577572:358421535842153584427213Streptomyces cattleya NRRL 8057, complete genomehypothetical protein4e-1063.5
NC_016111:1546505:156251615625161562761246Streptomyces cattleya NRRL 8057, complete genomehypothetical protein4e-1063.5
NC_003155:3913789:391465539146553914867213Streptomyces avermitilis MA-4680, complete genomehypothetical protein5e-1063.2
NC_016111:5515462:552017455201745520362189Streptomyces cattleya NRRL 8057, complete genomehypothetical protein7e-1062.8
NC_016582:9551123:955695495569549557145192Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein9e-1062.4
NC_003888:7337453:735834973583497358552204Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-0962
NC_016582:7699420:771727277172727717478207Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-0961.2
NC_013929:7278414:728795072879507288135186Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-0961.2
NC_013595:8553904:856210985621098562315207Streptosporangium roseum DSM 43021, complete genomehypothetical protein4e-0960.1
NC_016582:4983222:499046449904644990679216Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein3e-0857.4
NC_016887:5988878:599565059956505995853204Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein3e-0857
NC_016887:4403872:441580044158004416006207Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein5e-0856.6
NC_015953:3313000:332841433284143328632219Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein8e-0855.8
NC_016111:3577572:358445135844513584663213Streptomyces cattleya NRRL 8057, complete genomehypothetical protein8e-0855.8
NC_016582:5769080:577462457746245774845222Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein9e-0855.5
NC_016111:1546505:156278115627811563026246Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-0755.1
NC_016582:5769080:577484257748425775060219Streptomyces bingchenggensis BCW-1 chromosome, complete genomeregulatory protein3e-0753.9
NC_016582:3763476:377244737724473772656210Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein5e-0753.1
NC_007333:1129826:114199611419961142181186Thermobifida fusca YX, complete genomehypothetical protein7e-0752.8
NC_021177:2309615:232169023216902321899210Streptomyces fulvissimus DSM 40593, complete genomehypothetical protein7e-0752.8
NC_013093:7174636:717858671785867178771186Actinosynnema mirum DSM 43827, complete genomeprotein of unknown function DUF3976e-0752.8
NC_018524:301992:310031310031310204174Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehypothetical protein9e-0752.4
NC_009953:1581088:159174815917481591939192Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein1e-0652
NC_007333:1129826:114269511426951142889195Thermobifida fusca YX, complete genomehypothetical protein1e-0652
NC_021177:2309615:232333723233372323546210Streptomyces fulvissimus DSM 40593, complete genomehypothetical protein2e-0651.2
NC_006361:498305:507996507996508202207Nocardia farcinica IFM 10152, complete genomehypothetical protein4e-0650.4
NC_003155:6295078:630326863032686303480213Streptomyces avermitilis MA-4680, complete genomehypothetical protein5e-0650.1
NC_003888:6853107:685965868596586859903246Streptomyces coelicolor A3(2), complete genomehypothetical protein5e-0650.1