Pre_GI: BLASTP Hits

Some Help

Query: NC_016582:9551123:9567239 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 9567239, End: 9568081, Length: 843

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014549:14000:178731787318706834Arthrobacter arilaitensis Re117 plasmid pRE117-1, complete6e-93340
NC_003450:1903110:198877519887751989605831Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein7e-84310
NC_013131:4356247:437061143706114371486876Catenulispora acidiphila DSM 44928, complete genometransposase IS4 family protein4e-73274
NC_014550:3316115:335003033500303350761732Arthrobacter arilaitensis Re117, complete genometransposase of ISAar38, IS5 family, IS427 group8e-73273
NC_014623:6651798:665943166594316660225795Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase, is4-like protein7e-36150
NC_005027:6143730:615251461525146153383870Rhodopirellula baltica SH 1, complete genomeprobable transposase3e-31135
NC_018750:6070260:607913960791396079993855Streptomyces venezuelae ATCC 10712, complete genometransposase7e-29127
NC_014221:3068222:308245630824563083223768Truepera radiovictrix DSM 17093 chromosome, complete genome2e-27123
NC_015312:6717973:671965967196596720468810Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS4 family protein1e-25116
NC_014623:6651798:665859966585996659408810Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase, is4-like protein2e-24113
NC_014623:7331860:734429673442967345105810Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase, is4-like protein3e-24112
NC_014623:4426416:443932444393244440133810Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase, is4-like protein4e-24112
NC_018524:1745949:175883917588391759642804Nocardiopsis alba ATCC BAA-2165 chromosome, complete genometransposase DDE domain protein1e-22107
NC_008752:558828:565622565622566134513Acidovorax avenae subsp. citrulli AAC00-1, complete genometransposase, IS4 family protein1e-20100
NC_015381:3457784:349387934938793494430552Burkholderia gladioli BSR3 chromosome 1, complete sequenceTransposase1e-1997.1
NC_008752:2056547:206526520652652065786522Acidovorax avenae subsp. citrulli AAC00-1, complete genometransposase, IS4 family protein2e-1996.7
NC_003888:56225:697996979970647849Streptomyces coelicolor A3(2), complete genometransposase1e-1996.7
NC_012721:1686450:169030016903001690812513Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase, IS4 family protein3e-1995.5
NC_012720:114489:131206131206131718513Burkholderia glumae BGR1 plasmid bglu_3p, complete sequence3e-1995.5
NC_012723:71637:790607906079572513Burkholderia glumae BGR1 plasmid bglu_1p, complete sequenceTransposase, IS4 family protein3e-1995.5
NC_015314:89815:104608104608105289682Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete1e-1790.5
NC_006087:2292791:230524223052422306087846Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-1790.1
NC_012724:2547500:255709025570902557752663Burkholderia glumae BGR1 chromosome 1, complete genomeTransposase, IS47e-1684.7
NC_012721:137046:143893143893144681789Burkholderia glumae BGR1 chromosome 2, complete genome7e-1684.7
NC_012721:1052883:106333310633331064121789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase7e-1684.7
NC_014310:1822751:187172918717291872277549Ralstonia solanacearum PSI07 megaplasmid, complete sequencetransposase, is4-like7e-1684.3
NC_012721:979656:979656979656980444789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase8e-1684.3
NC_021177:1418213:143120114312011431698498Streptomyces fulvissimus DSM 40593, complete genomeIS4 family transposase1e-1584
NC_012720:114489:132821132821133609789Burkholderia glumae BGR1 plasmid bglu_3p, complete sequenceTransposase1e-1583.6
NC_012720:114489:138752138752139540789Burkholderia glumae BGR1 plasmid bglu_3p, complete sequenceTransposase1e-1583.6
NC_012721:770651:799046799046799834789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase1e-1583.6
NC_012721:1986436:199255119925511993339789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase2e-1583.2
NC_006513:286549:299420299420299893474Azoarcus sp. EbN1, complete genometransposase, is4 family, fragment2e-1583.2
NC_013929:10950:184981849819010513Streptomyces scabiei 87.22 chromosome, complete genomeIS transposase2e-1582.8
NC_013929:4807910:482213548221354822632498Streptomyces scabiei 87.22 chromosome, complete genomeIS transposase3e-1582.4
NC_017030:5558429:557100955710095571812804Corallococcus coralloides DSM 2259 chromosome, complete genometransposase, is4-like protein1e-1480.5
NC_013892:2689645:269289426928942693301408Xenorhabdus bovienii SS-2004 chromosome, complete genometransposase2e-1480.1
NC_010617:263985:283499283499284167669Kocuria rhizophila DC2201, complete genomeputative transposase3e-1479
NC_007951:1042291:105402510540251054654630Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase5e-1478.6
NC_009142:5647737:567176656717665672590825Saccharopolyspora erythraea NRRL 2338, complete genometransposase5e-1478.6
NC_009142:2822260:283713328371332837957825Saccharopolyspora erythraea NRRL 2338, complete genometransposase7e-1478.2
NC_009142:2480608:250761225076122508436825Saccharopolyspora erythraea NRRL 2338, complete genometransposase7e-1478.2
NC_012721:1635999:164307216430721643443372Burkholderia glumae BGR1 chromosome 2, complete genome1e-1377
NC_016111:6222461:623352962335296234098570Streptomyces cattleya NRRL 8057, complete genometransposase3e-1375.9
NC_007337:10464:244892448925277789Ralstonia eutropha JMP134 plasmid 1, complete sequenceTransposase, IS46e-1375.1
NC_012721:2556160:257468425746842575346663Burkholderia glumae BGR1 chromosome 2, complete genome5e-1375.1
NC_012721:770651:777391777391778179789Burkholderia glumae BGR1 chromosome 2, complete genome5e-1375.1
NC_012721:2021885:203459420345942035382789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase5e-1375.1
NC_012721:770651:822609822609823397789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase5e-1375.1
NC_016626:400080:413171413171413686516Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative transposase IS48e-1374.3
NC_012720:114489:120611120611121399789Burkholderia glumae BGR1 plasmid bglu_3p, complete sequenceTransposase1e-1274.3
NC_012724:3222415:323547732354773236265789Burkholderia glumae BGR1 chromosome 1, complete genome1e-1274.3
NC_012724:1308000:132067013206701321458789Burkholderia glumae BGR1 chromosome 1, complete genomeTransposase, IS41e-1273.9
NC_012718:27089:337143371434502789Burkholderia glumae BGR1 plasmid bglu_2p, complete sequenceTransposase1e-1273.9
NC_007645:3478630:349204934920493492567519Hahella chejuensis KCTC 2396, complete genomeTransposase and inactivated derivatives2e-1273.6
NC_007645:3870466:391048839104883911006519Hahella chejuensis KCTC 2396, complete genomeTransposase and inactivated derivatives2e-1273.6
NC_007645:2628423:263435226343522634870519Hahella chejuensis KCTC 2396, complete genomeTransposase and inactivated derivatives2e-1273.6
NC_007645:5747721:575565857556585756176519Hahella chejuensis KCTC 2396, complete genomeTransposase and inactivated derivatives2e-1273.6
NC_010627:233572:240153240153240626474Burkholderia phymatum STM815 plasmid pBPHY02, complete sequence3e-1272.8
NC_012721:1052883:106838510683851069173789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase4e-1272.4
NC_009142:2565561:257343925734392573867429Saccharopolyspora erythraea NRRL 2338, complete genometransposase, IS4 family5e-1272
NC_010002:1879220:192708419270841927506423Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein5e-1168.6
NC_009142:2725000:273820627382062738634429Saccharopolyspora erythraea NRRL 2338, complete genomeIS1647-like transposase5e-1168.6
NC_008148:1859888:188805218880521888315264Rubrobacter xylanophilus DSM 9941, complete genome6e-1168.2
NC_015957:5225903:523182052318205232287468Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1067.4
NC_010572:1:272802728027747468Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase1e-1067.4
NC_010572:8493946:851818385181838518650468Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase1e-1067.4
NC_017186:6395435:642739464273946427792399Amycolatopsis mediterranei S699 chromosome, complete genomeIS4 family transposase2e-1067
NC_014318:6395392:642735164273516427749399Amycolatopsis mediterranei U32 chromosome, complete genomeIS4 family transposase2e-1067
NC_007949:9839:106231062311156534Polaromonas sp. JS666 plasmid 1, complete sequence2e-1067
NC_013892:2689645:269248426924842692885402Xenorhabdus bovienii SS-2004 chromosome, complete genometransposase2e-1066.6
NC_007777:461500:473885473885474535651Frankia sp. CcI3, complete genometransposase, IS42e-1066.2
NC_003296:87313:101434101434101820387Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeTIS1421-transposase protein B3e-1066.2
NC_003296:673790:717424717424717810387Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeIS1421-transposase protein B3e-1066.2
NC_020126:6791726:680246668024666802960495Myxococcus stipitatus DSM 14675, complete genometransposase, is4-like protein3e-1065.9
NC_009784:1231791:124860812486081248961354Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein4e-1065.5
NC_012723:71637:923769237692741366Burkholderia glumae BGR1 plasmid bglu_1p, complete sequencehypothetical protein4e-1065.5
NC_015953:2349503:236568223656822366083402Streptomyces sp. SirexAA-E chromosome, complete genometransposase IS4 family protein4e-1065.5
NC_010801:481601:481601481601482005405Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu18 truncated transposase8e-1064.7
NC_010087:376918:442853442853443263411Burkholderia multivorans ATCC 17616 chromosome 3, completetransposase IS4 family protein8e-1064.3
NC_014228:1712339:174251117425111743272762Xenorhabdus nematophila ATCC 19061, complete genometransposase1e-0963.9
NC_017249:8576294:860338686033868604159774Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-0963.5
NC_019892:429975:442087442087442644558Singulisphaera acidiphila DSM 18658 chromosome, complete genome1e-0963.5
NC_012723:71637:846138461384978366Burkholderia glumae BGR1 plasmid bglu_1p, complete sequencehypothetical protein2e-0962.8
NC_009784:1231791:124816612481661248564399Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein3e-0962.4
NC_013722:3081459:308782530878253088205381Xanthomonas albilineans, complete genomeputative transposase (fragment) protein3e-0962.4
NC_013722:1425588:144637514463751446755381Xanthomonas albilineans, complete genomeputative tis1421-transposase protein b3e-0962.4
NC_014228:2883500:290947029094702910231762Xenorhabdus nematophila ATCC 19061, complete genometransposase5e-0962
NC_014836:2527000:252724325272432528080838Desulfurispirillum indicum S5 chromosome, complete genometransposase4e-0962
NC_014836:1052214:105894810589481059785838Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein4e-0962
NC_010002:4073724:409164440916444091982339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein8e-0961.2
NC_010002:3980832:399090239909023991240339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein8e-0961.2
NC_010002:4890192:489831248983124898650339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein8e-0961.2
NC_010002:3980832:398613339861333986471339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein8e-0961.2
NC_010002:3399770:341327334132733413611339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein8e-0961.2
NC_010002:1879220:192198019219801922318339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein8e-0961.2
NC_014318:6395392:642691764269176427270354Amycolatopsis mediterranei U32 chromosome, complete genomeIS1647-like transposase9e-0960.8
NC_017186:6395435:642696064269606427313354Amycolatopsis mediterranei S699 chromosome, complete genomeIS1647-like transposase9e-0960.8
NC_012779:2619871:263026026302602630574315Edwardsiella ictaluri 93-146, complete genomehypothetical protein9e-0960.8
NC_014836:993448:100570510057051006542838Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein1e-0860.5
NC_014836:2581939:258939425893942590231838Desulfurispirillum indicum S5 chromosome, complete genometransposase1e-0860.5
NC_013730:4811911:482177148217714822526756Spirosoma linguale DSM 74, complete genometransposase IS4 family protein2e-0860.1
NC_013730:5372608:539049053904905391245756Spirosoma linguale DSM 74, complete genometransposase IS4 family protein2e-0860.1
NC_013730:3137391:314290231429023143657756Spirosoma linguale DSM 74, complete genometransposase IS4 family protein2e-0860.1
NC_013730:6471484:649256064925606493315756Spirosoma linguale DSM 74, complete genometransposase IS4 family protein2e-0860.1
NC_008750:2332000:235098323509832351744762Shewanella sp. W3-18-1, complete genometransposase, IS4 family protein3e-0858.9
NC_014836:2527000:253370525337052534542838Desulfurispirillum indicum S5 chromosome, complete genometransposase5e-0858.5
NC_003155:5163382:517253351725335172976444Streptomyces avermitilis MA-4680, complete genomeIS1647-like transposase7e-0858.2
NC_015422:3493396:350260935026093503034426Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS4 family protein7e-0858.2
NC_008268:1748635:175295417529541753316363Rhodococcus sp. RHA1, complete genomepossible transposase8e-0857.8
NC_006361:2225072:223726622372662237676411Nocardia farcinica IFM 10152, complete genomeputative transposase1e-0757.4
NC_008752:3828438:384022538402253840563339Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-0757
NC_017030:5558429:560512256051225605712591Corallococcus coralloides DSM 2259 chromosome, complete genometransposase, is4-like protein2e-0756.2
NC_013131:621366:626030626030626230201Catenulispora acidiphila DSM 44928, complete genome4e-0755.8
NC_014623:723089:745043745043745450408Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase3e-0755.8
NC_013595:891897:901100901100901535436Streptosporangium roseum DSM 43021, complete genome4e-0755.5
NC_012723:71637:785007850079022523Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence6e-0755.1
NC_009051:1730104:173931017393101739732423Methanoculleus marisnigri JR1, complete genometransposase, IS4 family protein1e-0654.3
NC_015186:2129046:213972821397282140555828Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element2e-0653.5
NC_015186:1126830:114111811411181141945828Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element2e-0653.5
NC_013757:3100515:311519331151933116080888Geodermatophilus obscurus DSM 43160, complete genometransposase IS4 family protein2e-0653.1
NC_004347:3028000:303831330383133039071759Shewanella oneidensis MR-1, complete genomehypothetical ISSod6, transposase2e-0653.1
NC_018524:2246225:225555122555512256390840Nocardiopsis alba ATCC BAA-2165 chromosome, complete genometransposase DDE domain protein3e-0652.4
NC_020126:6791726:680213868021386802518381Myxococcus stipitatus DSM 14675, complete genometransposase, is4-like protein5e-0652
NC_009142:2480608:250568425056842505983300Saccharopolyspora erythraea NRRL 2338, complete genometransposase, IS4 family5e-0652
NC_009142:2725000:273866727386672739038372Saccharopolyspora erythraea NRRL 2338, complete genomeIS1647-like transposase5e-0652
NC_010742:529500:533315533315534133819Brucella abortus S19 chromosome 1, complete sequenceTransposase6e-0651.6
NC_019673:3559185:356572235657223566204483Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-0550.8