Pre_GI: BLASTP Hits

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Query: NC_016582:9551123:9566362 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 9566362, End: 9567219, Length: 858

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018681:9262000:928034892803489281187840Nocardia brasiliensis ATCC 700358 chromosome, complete genomealpha/beta hydrolase fold protein3e-72272
NC_015566:4547702:455630245563024557147846Serratia sp. AS12 chromosome, complete genomealpha/beta hydrolase fold protein3e-63241
NC_014623:4662990:466441646644164665207792Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehydrolase3e-53208
NC_017030:3608000:361519636151963616017822Corallococcus coralloides DSM 2259 chromosome, complete genomehydrolase1e-50200
NC_016907:1:695469547847894Gordonia polyisoprenivorans VH2 plasmid p174, complete sequencealpha/beta hydrolase fold-containing protein5e-42171
NC_015145:1107500:111518911151891116070882Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomehydrolase or acyltransferase of alpha/beta superfamily2e-23109
NC_013947:4602959:462388246238824624718837Stackebrandtia nassauensis DSM 44728 chromosome, complete genomealpha/beta hydrolase fold protein1e-20100
NC_016816:1137904:114196011419601142856897Pantoea ananatis LMG 5342, complete genomealpha/beta hydrolase fold protein8e-2097.8
NC_014838:589581:607861607861608766906Pantoea sp. At-9b plasmid pPAT9B01, complete sequencealpha/beta hydrolase fold protein3e-1995.5
NC_007492:2771021:277319427731942774102909Pseudomonas fluorescens PfO-1, complete genomeAlpha/beta hydrolase fold2e-1893.6
NC_010682:3745000:374825137482513749159909Ralstonia pickettii 12J chromosome 1, complete sequencealpha/beta hydrolase fold2e-1893.2
NC_020418:3102460:310432131043213105277957Morganella morganii subsp. morganii KT, complete genomeEpoxide hydrolase4e-1892
NC_009850:1131492:114660711466071147428822Arcobacter butzleri RM4018, complete genomealpha/beta hydrolase fold protein7e-1891.3
NC_021066:3028421:304051230405123041408897Raoultella ornithinolytica B6, complete genomealpha/beta hydrolase fold domain-containing protein1e-1790.5
NC_018000:1914945:191611419161141917001888Sinorhizobium fredii USDA 257 chromosome, complete genomesoluble epoxide hydrolase2e-1789.7
NC_015563:3203012:325350232535023254398897Delftia sp. Cs1-4 chromosome, complete genomealpha/beta hydrolase fold protein2e-1686.7
NC_016830:530397:537455537455538417963Pseudomonas fluorescens F113 chromosome, complete genomealpha beta hydrolase fold protein5e-1581.6
NC_020908:4550414:456047045604704561381912Octadecabacter arcticus 238, complete genomehaloacetate dehalogenase DehH1e-1377
NC_015727:1357095:1374829137482913759501122Cupriavidus necator N-1 plasmid BB1p, complete sequencesoluble epoxide hydrolase2e-1376.3
NC_013956:3273340:329529232952923296188897Pantoea ananatis LMG 20103 chromosome, complete genomeMhpC4e-1375.5
NC_016514:2079975:209627620962762097181906Enterobacter cloacae EcWSU1 chromosome, complete genomesoluble epoxide hydrolase4e-1375.5
NC_014006:3124818:313957131395713140419849Sphingobium japonicum UT26S chromosome 1, complete genomeputative alpha/beta hydrolase2e-1273.6
NC_013093:7222000:723124772312477232116870Actinosynnema mirum DSM 43827, complete genomealpha/beta hydrolase fold protein3e-1272.4
NC_010505:5077162:508368750836875084535849Methylobacterium radiotolerans JCM 2831, complete genomealpha/beta hydrolase fold9e-1270.9
NC_009142:5459819:546476754647675465642876Saccharopolyspora erythraea NRRL 2338, complete genomealpha/beta hydrolase1e-1067
NC_014834:959986:988345988345989229885Rhodopseudomonas palustris DX-1 chromosome, complete genomealpha/beta hydrolase fold protein2e-0963.2
NC_011884:831905:853319853319854230912Cyanothece sp. PCC 7425, complete genomealpha/beta hydrolase fold protein3e-0962.8
NC_007413:868678:868678868678869541864Anabaena variabilis ATCC 29413, complete genomeAlpha/beta hydrolase fold4e-0962.4
NC_018524:4848154:484898648489864849864879Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomefluoroacetate dehalogenase4e-0962.4
NC_014830:532122:532122532122533033912Intrasporangium calvum DSM 43043 chromosome, complete genomealpha/beta hydrolase fold protein2e-0860.1
NC_015514:477935:479747479747480628882Cellulomonas fimi ATCC 484 chromosome, complete genomealpha/beta hydrolase fold protein3e-0859.3
NC_011894:3161289:316334631633463164233888Methylobacterium nodulans ORS 2060, complete genomealpha/beta hydrolase fold protein3e-0859.3
NC_016631:1329702:134463413446341345515882Granulicella mallensis MP5ACTX8 chromosome, complete genomealpha/beta hydrolase fold protein1e-0757.4
NC_014307:3179100:317910031791003180035936Ralstonia solanacearum CFBP2957 chromosome, complete genomehaloacetate dehalogenase2e-0757
NC_014391:421547:426478426478427410933Micromonospora aurantiaca ATCC 27029 chromosome, complete genomealpha/beta hydrolase fold protein2e-0757
NC_003272:5040500:505717450571745058037864Nostoc sp. PCC 7120, complete genomehypothetical protein2e-0756.6
NC_016582:1639375:168526816852681685735468Streptomyces bingchenggensis BCW-1 chromosome, complete genomealpha/beta hydrolase fold protein3e-0755.8
NC_020453:7826358:784973678497367850626891Agromonas oligotrophica S58 DNA, complete genomealpha/beta hydrolase fold protein6e-0755.1
NC_014963:1951108:196779519677951968742948Terriglobus saanensis SP1PR4 chromosome, complete genomealpha/beta hydrolase fold protein7e-0754.7
NC_013202:1492434:151302715130271513932906Halomicrobium mukohataei DSM 12286, complete genomealpha/beta hydrolase fold protein8e-0754.7
NC_010612:3969244:3969244396924439710281785Mycobacterium marinum M, complete genomeshort-chain dehydrogenase EphD9e-0754.3
NC_003295:271736:288087288087289013927Ralstonia solanacearum GMI1000, complete genomeHYPOTHETICAL HALOACETATE DEHALOGENASE H-1 PROTEIN2e-0653.5
NC_016582:10227196:102587641025876410259711948Streptomyces bingchenggensis BCW-1 chromosome, complete genomealpha/beta hydrolase fold protein2e-0653.5
NC_010511:1691753:169175316917531692724972Methylobacterium sp. 4-46 chromosome, complete genomealpha/beta hydrolase fold protein1e-0653.5
NC_014258:355845:3666673666673677131047Pantoea vagans C9-1 plasmid pPag3, complete sequenceGCN5-related N-acetyltransferase2e-0653.1
NC_014100:449541:471519471519472493975Caulobacter segnis ATCC 21756 chromosome, complete genomealpha/beta hydrolase fold protein2e-0653.1