Pre_GI: BLASTP Hits

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Query: NC_016582:9459566:9464857 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 9464857, End: 9466062, Length: 1206

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016002:1048420:1064475106447510656351161Pseudogulbenkiania sp. NH8B, complete genomeADP-ribosylglycohydrolase3e-67255
NC_018645:3719302:372614937261493727111963Desulfobacula toluolica Tol2, complete genomeADP-ribosylglycohydrolase5e-56218
NC_014721:2135500:2149284214928421502971014Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeADP-ribosylation/crystallin j13e-54212
NC_013851:2610847:2616790261679026183941605Allochromatium vinosum DSM 180 chromosome, complete genomeADP-ribosylation/Crystallin J18e-45181
NC_013715:767722:7835417835417846801140Rothia mucilaginosa DY-18, complete genomeADP-ribosylglycohydrolase3e-1893.2
NC_015681:102000:103876103876104793918Thermodesulfatator indicus DSM 15286 chromosome, complete genomeADP-ribosylation/Crystallin J11e-1791.3
NC_015520:224136:2393612393612408211461Mahella australiensis 50-1 BON chromosome, complete genomeADP-ribosylation/Crystallin J13e-1480.1
NC_015573:2323268:233986423398642340820957Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeADP-ribosyl-(dinitrogen reductase) hydrolase6e-1375.5
NC_010475:420978:422514422514423464951Synechococcus sp. PCC 7002, complete genomeADP-ribosylglycohydrolase1e-1274.3
NC_015389:1375315:1379397137939713804071011Coriobacterium glomerans PW2 chromosome, complete genomeADP-ribosylation/Crystallin J12e-0654.3
NC_019792:2524130:258353025835302584438909Natronobacterium gregoryi SP2 chromosome, complete genomeADP-ribosylglycohydrolase7e-0652
NC_008740:1484531:149701414970141497274261Marinobacter aquaeolei VT8, complete genomeADP-ribosylglycohydrolase7e-0652