Pre_GI: BLASTP Hits

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Query: NC_016582:9459566:9462126 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 9462126, End: 9463070, Length: 945

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014815:2363460:238104823810482381968921Micromonospora sp. L5 chromosome, complete genomehypothetical protein1e-65250
NC_014210:965130:981921981921982880960Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF756e-65247
NC_016783:1397975:144330314433031444244942Corynebacterium diphtheriae INCA 402 chromosome, complete genomeproteasome assembly chaperone2e-49196
NC_016785:1357500:140086314008631401804942Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeproteasome assembly chaperone2e-49196
NC_016787:1350676:141428914142891415230942Corynebacterium diphtheriae HC03 chromosome, complete genomeproteasome assembly chaperone2e-49196
NC_016788:1376000:141775414177541418695942Corynebacterium diphtheriae HC04 chromosome, complete genomeproteasome assembly chaperone2e-49196
NC_016790:1345638:139035713903571391298942Corynebacterium diphtheriae VA01 chromosome, complete genomeproteasome assembly chaperone2e-49196
NC_016799:1439000:147452114745211475462942Corynebacterium diphtheriae 31A chromosome, complete genomeproteasome assembly chaperone2e-49196
NC_016800:1411000:145085214508521451793942Corynebacterium diphtheriae BH8 chromosome, complete genomeproteasome assembly chaperone2e-49196
NC_016801:1422500:146450514645051465446942Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeproteasome assembly chaperone2e-49196
NC_016802:1317365:140750214075021408443942Corynebacterium diphtheriae HC02 chromosome, complete genomeproteasome assembly chaperone2e-49196
NC_002935:1378566:143436814343681435309942Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein1e-49196
NC_016786:1359064:142297614229761423917942Corynebacterium diphtheriae HC01 chromosome, complete genomeproteasome assembly chaperone3e-49195
NC_016782:1385800:142271114227111423652942Corynebacterium diphtheriae 241 chromosome, complete genomeproteasome assembly chaperone3e-49195
NC_017317:1463466:1466641146664114676541014Corynebacterium ulcerans 809 chromosome, complete genomeproteasome assembly chaperone1e-47190
NC_017303:1328777:1331945133194513329581014Corynebacterium pseudotuberculosis I19 chromosome, complete genomeProteasome assembly chaperones 2 (PAC2)2e-47189
NC_014329:1328949:1332117133211713331301014Corynebacterium pseudotuberculosis FRC41 chromosome, completeproteasome assembly chaperone3e-47188
NC_016781:1327516:1331937133193713329501014Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeproteasome assembly chaperones 2 (PAC2)3e-47188
NC_017031:1328500:1331923133192313329361014Corynebacterium pseudotuberculosis P54B96 chromosome, completeProteasome assembly chaperones 2 (PAC2)3e-47188
NC_017300:1326331:1329499132949913305121014Corynebacterium pseudotuberculosis 1002 chromosome, completeProteasome assembly chaperones 2 (PAC2)3e-47188
NC_017301:1328500:1331804133180413328171014Corynebacterium pseudotuberculosis C231 chromosome, completeProteasome assembly chaperones 2 (PAC2)3e-47188
NC_015683:1467000:1470340147034014713531014Corynebacterium ulcerans BR-AD22 chromosome, complete genomeproteasome assembly chaperone3e-47188
NC_016932:1309644:1316810131681013178231014Corynebacterium pseudotuberculosis 316 chromosome, complete genomeproteasome assembly chaperones 2 (PAC2)2e-46186
NC_017305:1326351:132951913295191330448930Corynebacterium pseudotuberculosis PAT10 chromosome, completeProteasome assembly chaperones 2 (PAC2)5e-45181
NC_013715:767722:778260778260779165906Rothia mucilaginosa DY-18, complete genomemethionine synthase I7e-40164
NC_016789:1432000:146821514682151468868654Corynebacterium diphtheriae PW8 chromosome, complete genomeproteasome assembly chaperone5e-31135
NC_013174:1254874:127417612741761275066891Jonesia denitrificans DSM 20603, complete genomeprotein of unknown function DUF753e-1066.2
NC_014815:5888934:590456459045645905433870Micromonospora sp. L5 chromosome, complete genomehypothetical protein3e-1066.2