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Query: NC_016582:9050528:9061648 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 9061648, End: 9062652, Length: 1005

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012669:96966:1135891135891146291041Beutenbergia cavernae DSM 12333, complete genomeLuciferase-like monooxygenase2e-1067
NC_016111:5515462:5532511553251155335601050Streptomyces cattleya NRRL 8057, complete genomeFMN-dependent monooxygenase3e-1066.2
NC_015562:1299648:130121013012101302205996Methanotorris igneus Kol 5 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase3e-1066.2
NC_011896:427660:4382714382714393231053Mycobacterium leprae Br4923, complete genomeputative coenzyme F420-dependent oxidoreductase8e-1064.7
NC_002677:427500:4382624382624393141053Mycobacterium leprae TN, complete genomepossible coenzyme F420-dependent oxidoreductase8e-1064.7
NC_013407:146000:162714162714163709996Methanocaldococcus vulcanius M7, complete genome5,10-methylenetetrahydromethanopterin reductase1e-0964.3
NC_014122:143446:148423148423149418996Methanocaldococcus infernus ME chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase7e-0961.6
NC_007333:1129826:1147650114765011486871038Thermobifida fusca YX, complete genomeputative oxidoreductase3e-0859.3
NC_016943:4145981:4158195415819541592351041Blastococcus saxobsidens DD2, complete genomeputative Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase9e-0858.2
NC_014210:3817948:3836203383620338372431041Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,putative F420-dependent oxidoreductase1e-0757.8
NC_014253:2113233:213386221338622134848987Methanohalobium evestigatum Z-7303 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase1e-0757.4
NC_013757:4707960:4732534473253447335741041Geodermatophilus obscurus DSM 43160, complete genomeputative F420-dependent oxidoreductase4e-0756.2
NC_017955:4888990:4914847491484749158871041Modestobacter marinus, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase8e-0754.7
NC_013757:2659930:2678214267821426792541041Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein1e-0653.9
NC_016582:10227196:1027079110270791102718191029Streptomyces bingchenggensis BCW-1 chromosome, complete genomeluciferase family protein3e-0653.1