Pre_GI: BLASTP Hits

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Query: NC_016582:8243727:8266092 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 8266092, End: 8268551, Length: 2460

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016588:133943:1339431339431363122370Azospirillum lipoferum 4B plasmid AZO_p6, complete sequencehypothetical protein2e-104380
NC_009615:3490206:3494584349458434962181635Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein4e-29130
NC_009615:3818500:382115738211573821864708Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein4e-24114
NC_015577:1794560:181437818143781815148771Treponema azotonutricium ZAS-9 chromosome, complete genomeglycosyltransferase2e-0965.1
NC_008553:1038344:104664510466451047553909Methanosaeta thermophila PT, complete genomeglycosyl transferase, family 22e-0965.1
NC_003413:748906:761479761479762375897Pyrococcus furiosus DSM 3638, complete genomeglycosyl transferase3e-0861.6
NC_012969:1931595:193814719381471938995849Methylovorus glucosetrophus SIP3-4 chromosome, complete genomefamily 2 glycosyl transferase5e-0860.5
NC_000868:1107639:111283411128341113730897Pyrococcus abyssi GE5, complete genomeglycosyl transferase6e-0860.1
NC_007759:2638992:2643298264329826443891092Syntrophus aciditrophicus SB, complete genomeglycosyltransferase8e-0860.1
NC_011529:1554500:155963115596311560515885Thermococcus onnurineus NA1, complete genomeglycosyltransferase1e-0759.3
NC_011027:1971580:1987613198761319891301518Chlorobaculum parvum NCIB 8327, complete genomeglycosyl transferase family 21e-0759.3
NC_011979:1590432:160907716090771610039963Geobacter sp. FRC-32, complete genomeglycosyl transferase family 21e-0759.3
NC_014012:1676983:168886616888661689621756Shewanella violacea DSS12, complete genomeglycosyl transferase, group 2 family protein2e-0758.5
NC_008254:3980327:399075439907543991524771Mesorhizobium sp. BNC1, complete genomeglycosyl transferase, family 22e-0758.5
NC_012804:2017531:203467920346792035593915Thermococcus gammatolerans EJ3, complete genomeGlycosyltransferase, family 23e-0758.2
NC_015977:189101:1990041990042008331830Roseburia hominis A2-183 chromosome, complete genometype 12 methyltransferase3e-0757.8
NC_015578:247266:259142259142259918777Treponema primitia ZAS-2 chromosome, complete genomeglycosyltransferase family 323e-0757.8
NC_015673:709411:7240677240677260311965Corynebacterium resistens DSM 45100 chromosome, complete genomeglycosyl transferase3e-0757.8
NC_017271:2789667:281284128128412813548708Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein4e-0757.8
NC_013714:2086526:2098110209811020991321023Bifidobacterium dentium Bd1, complete genomeGlycosyl transferase, family 25e-0757.4
NC_015673:709411:7261367261367280041869Corynebacterium resistens DSM 45100 chromosome, complete genomeglycosyl transferase4e-0757.4
NC_015673:709411:7281097281097299861878Corynebacterium resistens DSM 45100 chromosome, complete genomeglycosyl transferase4e-0757.4
NC_016109:6640000:665742366574236658196774Kitasatospora setae KM-6054, complete genomeputative glycosyltransferase5e-0757
NC_009925:5794495:580067958006795801662984Acaryochloris marina MBIC11017, complete genomeglycosyl transferase, family 2, putative7e-0756.6
NC_015554:2355379:236298523629852363923939Alteromonas sp. SN2 chromosome, complete genomeglycosyl transferase family protein8e-0756.6
NC_002977:652481:6578176578176588421026Methylococcus capsulatus str. Bath, complete genomeglycosyl transferase, group 2 family protein1e-0656.2
NC_007645:5397526:541275854127585413645888Hahella chejuensis KCTC 2396, complete genomeGlycosyltransferase involved in cell wall biogenesis1e-0655.8
NC_011769:3401353:3411353341135334124441092Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeglycosyl transferase family 21e-0655.8
NC_016051:1429800:144903414490341449945912Thermococcus sp. AM4 chromosome, complete genomeglycosyl transferase family protein2e-0655.5
NC_014830:1252249:1266681126668112687532073Intrasporangium calvum DSM 43043 chromosome, complete genomeglycosyl transferase family 22e-0655.1
NC_020409:77414:102398102398103210813Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeGlycosyl transferase family 22e-0655.1
NC_013530:2819569:284088928408892841683795Xylanimonas cellulosilytica DSM 15894, complete genomeglycosyl transferase family 22e-0655.1
NC_009615:1469642:149655214965521497304753Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein3e-0654.7
NC_019974:3816000:383095338309533831927975Natronococcus occultus SP4, complete genomeglycosyl transferase3e-0654.3
NC_009483:3544333:355772135577213558677957Geobacter uraniireducens Rf4 chromosome, complete genomeglycosyl transferase family protein7e-0653.1
NC_011884:1541256:1563457156345715646531197Cyanothece sp. PCC 7425, complete genomeglycosyl transferase family 27e-0653.1
NC_019974:2889375:290142829014282902366939Natronococcus occultus SP4, complete genomeglycosyl transferase9e-0653.1
NC_002939:1634843:165552216555221656454933Geobacter sulfurreducens PCA, complete genomeglycosyl transferase, group 2 family protein9e-0653.1