Pre_GI: BLASTP Hits

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Query: NC_016582:8031000:8047025 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 8047025, End: 8047843, Length: 819

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:6295078:631260163126016313419819Streptomyces avermitilis MA-4680, complete genomehypothetical protein2e-60232
NC_021177:2766910:277089727708972771766870Streptomyces fulvissimus DSM 40593, complete genomeIntegral membrane protein5e-55214
NC_013929:5097389:5114839511483951161161278Streptomyces scabiei 87.22 chromosome, complete genomesortase9e-47187
NC_003155:5302280:5311229531122953125781350Streptomyces avermitilis MA-4680, complete genomehypothetical protein2e-43176
NC_003155:5302280:530971253097125310404693Streptomyces avermitilis MA-4680, complete genomehypothetical protein4e-28125
NC_003155:5302280:531259253125925313332741Streptomyces avermitilis MA-4680, complete genomehypothetical protein5e-25114
NC_013929:5097389:511404951140495114804756Streptomyces scabiei 87.22 chromosome, complete genomesortase2e-24112
NC_014550:7560:195741957420350777Arthrobacter arilaitensis Re117, complete genomeputative sortase2e-23109
NC_009921:2565640:256659425665942567565972Frankia sp. EAN1pec, complete genomesortase family protein3e-2099.4
NC_013510:39975:616406164062218579Thermomonospora curvata DSM 43183, complete genomesortase family protein9e-1994
NC_014393:187454:206087206087206692606Clostridium cellulovorans 743B chromosome, complete genomesortase family protein4e-1788.6
NC_013521:345308:373816373816374589774Sanguibacter keddieii DSM 10542, complete genomesortase family protein, LPXTG-site transpeptidase1e-1686.7
NC_008262:227354:265826265826266389564Clostridium perfringens SM101, complete genomesortase family protein4e-1375.5
NC_003366:255480:293999293999294562564Clostridium perfringens str. 13, complete genomehypothetical protein6e-1374.7
NC_008593:1859861:187170518717051872298594Clostridium novyi NT, complete genomesortase family protein1e-1067
NC_015425:641000:656014656014656628615Clostridium botulinum BKT015925 chromosome, complete genomesortase3e-1065.5
NC_015683:2469481:247393324739332474820888Corynebacterium ulcerans BR-AD22 chromosome, complete genomehousekeeping sortase8e-1064.3
NC_009848:354202:372257372257372817561Bacillus pumilus SAFR-032, complete genomeC60A subfamily peptidase7e-0961.2
UCMB5137:3660165:366705036670503667640591Bacillus atrophaeus UCMB-5137hypothetical protein2e-0859.7
NC_014624:1768226:177188917718891772710822Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-0859.3
NC_014624:171394:193356193356194171816Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein8e-0857.8
NC_014644:1456689:1464864146486414660121149Gardnerella vaginalis ATCC 14019 chromosome, complete genomesortase1e-0757.4
NC_014829:722000:736026736026736547522Bacillus cellulosilyticus DSM 2522 chromosome, complete genomesortase family protein1e-0757
NC_006510:2044347:204843220484322049025594Geobacillus kaustophilus HTA426, complete genomehypothetical protein9e-0754.3
NC_015737:1385585:140057114005711401413843Clostridium sp. SY8519, complete genomehypothetical protein1e-0653.5
NC_014151:30488:530135301353888876Cellulomonas flavigena DSM 20109 chromosome, complete genomesortase family protein3e-0652.8
NC_016605:132253:147643147643148410768Pediococcus claussenii ATCC BAA-344 chromosome, complete genomesortase4e-0652