Pre_GI: BLASTP Hits

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Query: NC_016582:8031000:8033504 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 8033504, End: 8033998, Length: 495

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:5445081:544916054491605449993834Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein6e-50196
NC_016114:4614924:461874446187444619619876Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeHNH endonuclease3e-41167
NC_015953:2640500:265656526565652657269705Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein1e-28125
NC_015953:2640500:265591226559122656568657Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein3e-23107
NC_010572:5445081:544999054499905450625636Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein2e-22105
NC_016114:4614924:461961646196164620257642Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein6e-1993.6
NC_014371:1076642:108682510868251087475651Prevotella melaninogenica ATCC 25845 chromosome chromosome II,hypothetical protein3e-1477.4
NC_019771:2461000:247208724720872472863777Anabaena cylindrica PCC 7122, complete genomeHNH endonuclease5e-1477